RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	CCT8L1P	A6NM43	557 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	TYROBP	O43914	113 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	KIAA0513	O60268	411 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	RAD51D	O75771	328 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	CPSF4	O95639	269 aa	Known RBP	14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	PMS2P2	O95744	297 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	C1QC	P02747	245 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	UQCRC2	P22695	453 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	TTK	P33981	857 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	ZNF83	P51522	516 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	PLAUR	Q03405	335 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	CHRNE	Q04844	493 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	C11orf71	Q6IPW1	123 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	HMGN2P46	Q86SG4	172 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	ANKRD46	Q86W74	232 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	NUDCD3	Q8IVD9	361 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	PIAS4	Q8N2W9	510 aa	Predicted RBP	14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	OR52N5	Q8NH56	324 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	ZNF563	Q8TA94	476 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	APH1A	Q96BI3	265 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	ROPN1L	Q96C74	230 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	PPP1R36	Q96LQ0	422 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	DHRS9	Q9BPW9	319 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	C1QTNF6	Q9BXI9	259 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	OR11A1	Q9GZK7	315 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	POLE3	Q9NRF9	147 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	CHRNA9	Q9UGM1	479 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	SLC35A3	Q9Y2D2	325 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	HDGFL3	Q9Y3E1	203 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460	WDR45	Q9Y484	360 aa		14.4	□□□□□ -0.1
PRKAR1A-206	ENST00000585460		A0A096LNT2	108 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CLDN24	A6NM45	220 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	GPR171	O14626	319 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ANKRD28	O15084	1053 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	AGR2	O95994	175 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CCNA2	P20248	432 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	PTAFR	P25105	342 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CD40	P25942	277 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	FKBP2	P26885	142 aa	Known RBP	14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CLK1	P49759	484 aa	Known RBP	14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SLC16A1	P53985	500 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	KCNJ10	P78508	379 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	H3F3A	P84243	136 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	IFFO1	Q0D2I5	559 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	FUT5	Q11128	374 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	GABRA6	Q16445	453 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	NRF1	Q16656	503 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ATAD3B	Q5T9A4	648 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SAXO2	Q658L1	398 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	EMB	Q6PCB8	327 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TMEM108	Q6UXF1	575 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	FRRS1	Q6ZNA5	592 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	GRINA	Q7Z429	371 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	LSR	Q86X29	649 aa	Predicted RBP	14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	WDR31	Q8NA23	367 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	OIT3	Q8WWZ8	545 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ADAD1	Q96M93	576 aa	Known RBP	14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ZIM3	Q96PE6	472 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CACNG6	Q9BXT2	260 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	DPY30	Q9C005	99 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	C20orf27	Q9GZN8	174 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CBLN4	Q9NTU7	201 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ASB6	Q9NWX5	421 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	MGAT4B	Q9UQ53	548 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TRAPPC4	Q9Y296	219 aa		14.39	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	FAM234B	A2RU67	622 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	WDR91	A4D1P6	747 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460		A8MV72	311 aa	Predicted RBP	14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	PDLIM1	O00151	329 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	DNPH1	O43598	174 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	MRPL33	O75394	65 aa	Known RBP	14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	IDH2	P48735	452 aa	Known RBP	14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	OR2B6	P58173	313 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SPOCK1	Q08629	439 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CASP8	Q14790	479 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	PDCD2	Q16342	344 aa	Predicted RBP	14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ANXA8L1	Q5VT79	327 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SLC22A25	Q6T423	547 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ARFGAP2	Q8N6H7	521 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ZNF781	Q8N8C0	355 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	PIGX	Q8TBF5	258 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	CNOT9	Q92600	299 aa	Known RBP	14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	HTRA1	Q92743	480 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ZHX1-C8orf76	Q96EF9	292 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	NEURL3	Q96EH8	262 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	PKNOX2	Q96KN3	472 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	TAS2R16	Q9NYV7	291 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	SPIN1	Q9Y657	262 aa	Predicted RBP	14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	MXRA5	Q9NR99	2828 aa		14.38	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ITGA5	P08648	1049 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	DHRS4L1	P0CG22	281 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	FABP6	P51161	128 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	NUDT6	P53370	316 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	ABCE1	P61221	599 aa	Known RBP	14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	VSNL1	P62760	191 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	RAB35	Q15286	201 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	OR7E24	Q6IFN5	339 aa		14.37	□□□□□ -0.11
PRKAR1A-206	ENST00000585460	PODNL1	Q6PEZ8	512 aa		14.37	□□□□□ -0.11

Retrieved 100 of 20,778 RNA–protein pairs in 70 ms