RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 ZNF440Q8IYI8 595 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 CLIP4Q8N3C7 705 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 DPP10Q8N608 796 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 NFKBIDQ8NI38 313 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 BBS10Q8TAM1 723 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 ARL5BQ96KC2 179 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 SPATA9Q9BWV2 254 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 RSPO3Q9BXY4 272 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 POLDIP3Q9BY77 421 aaKnown RBP9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 ADAM19Q9H013 955 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 CLEC4MQ9H2X3 399 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 CCDC134Q9H6E4 229 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 GP6Q9HCN6 339 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 KLHL13Q9P2N7 655 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 NDRG3Q9UGV2 375 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 OSGIN1Q9UJX0 560 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 ING1Q9UK53 422 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 PRDM4Q9UKN5 801 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 IFT52Q9Y366 437 aa9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 SPIN1Q9Y657 262 aaPredicted RBP9.15□□□□□ -0.94
PPP4R1-220ENST00000581835 CADP27708 2225 aa9.15□□□□□ -0.95
PPP4R1-220ENST00000581835 TMED7-TICAM2A0A0A6YYA0 188 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 TMEM72A0PK05 275 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 C5orf58C9J3I9 102 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 C16orf97H3BN30 126 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ANGPT2O15123 496 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 SMAD9O15198 467 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ATP8B1O43520 1251 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 CYTIPO60759 359 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 PMS2P2O95744 297 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 YES1P07947 543 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 VIMP08670 466 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 TFPIP10646 304 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 UQCRBP14927 111 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ETS2P15036 469 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 CCNA2P20248 432 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 TACR3P29371 465 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 CLK1P49759 484 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 POLR2HP52434 150 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ARFIP2P53365 341 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 CSNK2A1P68400 391 aaPredicted RBP9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 CDK6Q00534 326 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ADRM1Q16186 407 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ZSWIM7Q19AV6 140 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 EXOC3L2Q2M3D2 409 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF311Q5JNZ3 666 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 TMEM201Q5SNT2 666 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 REEP3Q6NUK4 255 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 BEND4Q6ZU67 534 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 NUFIP2Q7Z417 695 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 DHDDSQ86SQ9 333 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 CDH24Q86UP0 819 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 LSRQ86X29 649 aaPredicted RBP9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 LURAP1LQ8IV03 231 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 NRGNQ92686 78 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 DNAJA3Q96EY1 480 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 WFIKKN1Q96NZ8 548 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 PSD2Q9BQI7 771 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 CPPED1Q9BRF8 314 aaPredicted RBP9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 OR11A1Q9GZK7 315 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 TMEM38AQ9H6F2 299 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ARMC7Q9H6L4 198 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 C12orf49Q9H741 205 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 BCO1Q9HAY6 547 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 KLHL9Q9P2J3 617 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 CORO2BQ9UQ03 480 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 TMED7Q9Y3B3 224 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 HDGFL3Q9Y3E1 203 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 TESMINQ9Y4I5 508 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 PRRC2AP48634 2157 aaKnown RBP9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 HIVEP1P15822 2718 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ITPR3Q14573 2671 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ARID1AO14497 2285 aa9.14□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF469Q96JG9 3925 aaPredicted RBP9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 MED13LQ71F56 2210 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 ALPK2Q86TB3 2170 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 ENO4A6NNW6 628 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 CASKO14936 926 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF208O43345 1280 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 GOSR1O95249 250 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 FESP07332 822 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 PRG2P13727 222 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 MAP2K6P52564 334 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 COPZ1P61923 177 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 RASGEF1BQ0VAM2 473 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 SF3A3Q12874 501 aaKnown RBP eCLIP9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 ABLIM2Q6H8Q1 611 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 WBP2NLQ6ICG8 309 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 TFAP2EQ6VUC0 442 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 STAC2Q6ZMT1 411 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 C22orf34Q6ZV56 151 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF550Q7Z398 422 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 SERPINA11Q86U17 422 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 MTDHQ86UE4 582 aaKnown RBP9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 STK32CQ86UX6 486 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 CDC20BQ86Y33 519 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 SLC35B4Q969S0 331 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 DDIT4LQ96D03 193 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 ANKRD27Q96NW4 1050 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms