RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 SLC30A6Q6NXT4 461 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 CACTIN-AS1Q8N1I8 211 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 OR8J1Q8NGP2 316 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 BRIX1Q8TDN6 353 aaKnown RBP9.58□□□□□ -0.88
SS18-217ENST00000580958 TRUB1Q8WWH5 349 aaKnown RBP9.58□□□□□ -0.88
SS18-217ENST00000580958 GGHQ92820 318 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 SLC38A2Q96QD8 506 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 GPR87Q9BY21 358 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 B3GNT4Q9C0J1 378 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 FAM192AQ9GZU8 254 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 ADAM19Q9H013 955 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 METTL7AQ9H8H3 244 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 C12orf10Q9HB07 376 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 GALNT9Q9HCQ5 603 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 PSORS1C1Q9UIG5 152 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 HRH3Q9Y5N1 445 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 NCKAP5O14513 1909 aa9.58□□□□□ -0.88
SS18-217ENST00000580958 SMIM31A0A1B0GVY4 71 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 SH3D21A4FU49 640 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 ANKUB1A6NFN9 424 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 LRRN3E7EW58 273 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 STMND1H3BQB6 276 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 LCE2BO14633 110 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 TLX2O43763 284 aaPredicted RBP9.57□□□□□ -0.88
SS18-217ENST00000580958 HCN1O60741 890 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 OR7A10O76100 309 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 RCBTB2O95199 551 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 JUNBP17275 347 aaPredicted RBP9.57□□□□□ -0.88
SS18-217ENST00000580958 GRK5P34947 590 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 MAP2K4P45985 399 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 SSR4P51571 173 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 MLF1P58340 268 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 C17orf67Q0P5P2 114 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 Q0VFX4 171 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 CHAF1BQ13112 559 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 PMS2P3Q13401 168 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 OCLNQ16625 522 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 ZNF791Q3KP31 576 aaPredicted RBP9.57□□□□□ -0.88
SS18-217ENST00000580958 OR5M10Q6IEU7 315 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 POMZP3Q6PJE2 187 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 SMARCD3Q6STE5 483 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 IL20RBQ6UXL0 311 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 SLC46A3Q7Z3Q1 461 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 BCDIN3DQ7Z5W3 292 aaKnown RBP9.57□□□□□ -0.88
SS18-217ENST00000580958 TMPRSS12Q86WS5 348 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 RPS19BP1Q86WX3 136 aaKnown RBP9.57□□□□□ -0.88
SS18-217ENST00000580958 RAB43Q86YS6 212 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 OR2T33Q8NG76 320 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 OR52L1Q8NGH7 329 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 OR51A7Q8NH64 312 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 ASB15Q8WXK1 588 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 FGF11Q92914 225 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 Q96MT0 163 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 TNFRSF13CQ96RJ3 184 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 COPS4Q9BT78 406 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 TMEM43Q9BTV4 400 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 PRRG3Q9BZD7 231 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 SLC19A3Q9BZV2 496 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 ENKD1Q9H0I2 346 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 UBQLN3Q9H347 655 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 HHATLQ9HCP6 504 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 VCX3AQ9NNX9 186 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 CCNB1IP1Q9NPC3 277 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 FKBP14Q9NWM8 211 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 P4HTMQ9NXG6 502 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 TAS2R10Q9NYW0 307 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 MED11Q9P086 117 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 NDUFA13Q9P0J0 144 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 PPP4R1LQ9P1A2 415 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 OSGIN1Q9UJX0 560 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 SIGLEC7Q9Y286 467 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 YARS2Q9Y2Z4 477 aaKnown RBP9.57□□□□□ -0.88
SS18-217ENST00000580958 KIAA1549Q9HCM3 1950 aa9.57□□□□□ -0.88
SS18-217ENST00000580958 WDFY3Q8IZQ1 3526 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 TMED7-TICAM2A0A0A6YYA0 188 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 TMEM72A0PK05 275 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 CLCA1A8K7I4 914 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 B4DXG7 233 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 PROB1E7EW31 1015 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 TP53I11O14683 189 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 SURF4O15260 269 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 MRPS14O60783 128 aaKnown RBP9.56□□□□□ -0.88
SS18-217ENST00000580958 WISP1O95388 367 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 FADS2O95864 444 aaKnown RBP9.56□□□□□ -0.88
SS18-217ENST00000580958 HMGN1P05114 100 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 CDK1P06493 297 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 STSP08842 583 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 ICAM2P13598 275 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 BMP7P18075 431 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 PCMT1P22061 227 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 CXCR1P25024 350 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 RBMS1P29558 406 aaKnown RBP9.56□□□□□ -0.88
SS18-217ENST00000580958 MASP1P48740 699 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 SLC9A3P48764 834 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 NOVA1P51513 510 aaKnown RBP9.56□□□□□ -0.88
SS18-217ENST00000580958 POLR2HP52434 150 aaKnown RBP9.56□□□□□ -0.88
SS18-217ENST00000580958 SUMO3P55854 103 aaPredicted RBP9.56□□□□□ -0.88
SS18-217ENST00000580958 EFNB1P98172 346 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 EGR4Q05215 589 aa9.56□□□□□ -0.88
SS18-217ENST00000580958 FHL1Q13642 323 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms