RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 CHRM4P08173 479 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 RPS4Y1P22090 263 aaKnown RBP20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 CDKN2CP42773 168 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 MAGEA8P43361 318 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 SYPL1Q16563 259 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 SSX8Q7RTT4 187 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 GALNT5Q7Z7M9 940 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 CIARTQ8N365 385 aaPredicted RBP20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 ANKFN1Q8N957 763 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 LILRB1Q8NHL6 650 aaPredicted RBP20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 PIWIL2Q8TC59 973 aaKnown RBP20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 INPP5KQ9BT40 448 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 ESRP2Q9H6T0 727 aaKnown RBP20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 EMC3Q9P0I2 261 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 FN1P02751 2386 aaKnown RBP20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 USF3Q68DE3 2245 aa20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 ZNF716A6NP11 495 aa20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 C9JVG2 144 aa20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 FAAHO00519 579 aa20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 RYKP34925 604 aa20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 HTR3AP46098 478 aa20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 ADGRG3Q86Y34 549 aa20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 CNOT9Q92600 299 aaKnown RBP20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 ZBTB9Q96C00 473 aa20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 ARL5BQ96KC2 179 aa20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 ZBTB18Q99592 522 aa20.19■□□□□ 0.82
CDKN2A-212ENST00000578845 GOLGA8QA0A0J9YX86 632 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 GOLGA8OA6NCC3 632 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 GOLGA8NF8WBI6 632 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 CD3EP07766 207 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 IDO1P14902 403 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 SLC16A1P53985 500 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 PDCD4Q53EL6 469 aaKnown RBP20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 ATG16L1Q676U5 607 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 DNAJC14Q6Y2X3 702 aaPredicted RBP20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 ZNF621Q6ZSS3 439 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 HMGN2P46Q86SG4 172 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 ZHX1-C8orf76Q96EF9 292 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 MTHFD2LQ9H903 347 aaPredicted RBP20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 TRAPPC4Q9Y296 219 aa20.18■□□□□ 0.82
CDKN2A-212ENST00000578845 TRIM64A6NGJ6 449 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 TRIM64BA6NI03 449 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 LYZL6O75951 148 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 PGM3O95394 542 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 IL6P05231 212 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 DANCRP0C864 163 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 TFPIP10646 304 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 IGHV1-2P23083 117 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 IDH2P48735 452 aaKnown RBP20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 MAP2K6P52564 334 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 MVDP53602 400 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 H3F3AP84243 136 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 COX20Q5RI15 118 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 TIMM23BQ5SRD1 257 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 ALKBH2Q6NS38 261 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 P2RY8Q86VZ1 359 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 PIGXQ8TBF5 258 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 FBXW5Q969U6 566 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 ZNF775Q96BV0 537 aaPredicted RBP20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 PRDM4Q9UKN5 801 aa20.17■□□□□ 0.82
CDKN2A-212ENST00000578845 OVOL3O00110 214 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 AP3D1O14617 1153 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 GPR171O14626 319 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 ZNF208O43345 1280 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 KRT75O95678 551 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 LY6G6DO95868 133 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 GSNP06396 782 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 RPS4XP62701 263 aaKnown RBP20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 BSPH1Q075Z2 132 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 GNA13Q14344 377 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 MAPK11Q15759 364 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 ZNF672Q499Z4 452 aaPredicted RBP20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 FBXW9Q5XUX1 488 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 ATG4DQ86TL0 474 aaPredicted RBP20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 ZNF100Q8IYN0 542 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 MGARPQ8TDB4 240 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 WDR60Q8WVS4 1066 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 TLCD1Q96CP7 247 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 OR11A1Q9GZK7 315 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 ZIM2Q9NZV7 527 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 TMEM181Q9P2C4 612 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 DSPPQ9NZW4 1301 aa20.16■□□□□ 0.82
CDKN2A-212ENST00000578845 CADP27708 2225 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 CSPG4Q6UVK1 2322 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 DPRXA6NFQ7 191 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 RFXANKO14593 260 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 SLC22A3O75751 556 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 DBIP07108 87 aaKnown RBP20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 ZCCHC18P0CG32 403 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 KITP10721 976 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 GGT1P19440 569 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 SLC1A3P43003 542 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 POLR2HP52434 150 aaKnown RBP20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 CAPRIN1Q14444 709 aaKnown RBP20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 PPA1Q15181 289 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 GSTA3Q16772 222 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 MSANTD1Q6ZTZ1 278 aa20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 Q71RC1 249 aaPredicted RBP20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.15■□□□□ 0.82
CDKN2A-212ENST00000578845 MAVSQ7Z434 540 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms