RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 GADD45GO95257 159 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 LYPD3O95274 346 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 CST1P01037 141 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 IGHG3P01860 377 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 H1F0P07305 194 aaKnown RBP10.95□□□□□ -0.66
IFT20-207ENST00000578547 PNMTP11086 282 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 HOXB6P17509 224 aaKnown RBP10.95□□□□□ -0.66
IFT20-207ENST00000578547 BMP7P18075 431 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 CHMP24386 653 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 ADH6P28332 368 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 SHC1P29353 583 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 SRYQ05066 204 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 ST3GAL3Q11203 375 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 TRAM2Q15035 370 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 IQCCQ4KMZ1 466 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 SWT1Q5T5J6 900 aaKnown RBP10.95□□□□□ -0.66
IFT20-207ENST00000578547 WDR88Q6ZMY6 472 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 PIWIL3Q7Z3Z3 882 aaKnown RBP10.95□□□□□ -0.66
IFT20-207ENST00000578547 ADGRG3Q86Y34 549 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 NKAIN4Q8IVV8 208 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 C10orf67Q8IYJ2 551 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 LILRA2Q8N149 483 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 GHDCQ8N2G8 530 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 PAPD5Q8NDF8 572 aaKnown RBP10.95□□□□□ -0.66
IFT20-207ENST00000578547 TMEM255BQ8WV15 326 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 SLC38A4Q969I6 547 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 SLX1AQ9BQ83 275 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 OR11A1Q9GZK7 315 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 NMNAT1Q9HAN9 279 aaPredicted RBP10.95□□□□□ -0.66
IFT20-207ENST00000578547 MAN2C1Q9NTJ4 1040 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 ACAD8Q9UKU7 415 aa10.95□□□□□ -0.66
IFT20-207ENST00000578547 SPIN1Q9Y657 262 aaPredicted RBP10.95□□□□□ -0.66
IFT20-207ENST00000578547 A0A087WUJ7 227 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 ZC3H12DA2A288 527 aaKnown RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 NPIPA2E9PIF3 369 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 NPIPA3F8WFD2 350 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 AQP7O14520 342 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 EIF1AYO14602 144 aaKnown RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 ACTL6AO96019 429 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 THRBP10828 461 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 TDGF1P3P51864 188 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 DLX5P56178 289 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 ELF3P78545 371 aaPredicted RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 CRYZQ08257 329 aaKnown RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 PPP1R8Q12972 351 aaKnown RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 TMEM176BQ3YBM2 270 aaPredicted RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 KRTCAP3Q53RY4 240 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 SYT14P1Q58G82 188 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 OR2T5Q6IEZ7 315 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 ZFP1Q6P2D0 407 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 ARHGAP11AQ6P4F7 1023 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 TTC33Q6PID6 262 aaPredicted RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 GFRALQ6UXV0 394 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 PRICKLE2Q7Z3G6 844 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 ZNF605Q86T29 641 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 PIK3C3Q8NEB9 887 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 OR2T29Q8NH02 315 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 SLC25A43Q8WUT9 341 aaPredicted RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 DDIT4LQ96D03 193 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 DUS3LQ96G46 650 aaKnown RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 OR5B2Q96R09 309 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 PRSS27Q9BQR3 290 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 REEP1Q9H902 201 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 C12orf10Q9HB07 376 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 ARMC1Q9NVT9 282 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 VNN3Q9NY84 501 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 STOML1Q9UBI4 398 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 PRDM4Q9UKN5 801 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 CAMK2AQ9UQM7 478 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 SAMHD1Q9Y3Z3 626 aaKnown RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 AP4B1Q9Y6B7 739 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 U3KQV3 271 aa10.94□□□□□ -0.66
IFT20-207ENST00000578547 SMG1Q96Q15 3661 aaKnown RBP10.94□□□□□ -0.66
IFT20-207ENST00000578547 IGKV1D-42A0A075B6H8 117 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 TRBV4-1A0A0J9YWV2 114 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 A0A1B0GVC2 190 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 A0A1W2PNR3 127 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 GJE1A6NN92 205 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 A8MVM7 634 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 H0Y3Z8 333 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 H0YC42 278 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 H3BNX3 289 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 LINC01387J3KSC0 135 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 TNFRSF11BO00300 401 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 TNFSF11O14788 317 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 ADAMDEC1O15204 470 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 HNRNPRO43390 633 aaKnown RBP10.93□□□□□ -0.66
IFT20-207ENST00000578547 PIP5K1CO60331 668 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 E2F6O75461 281 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 LDLRP01130 860 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 FCGR1AP12314 374 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 LHX2P50458 406 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 TPD52P55327 224 aaPredicted RBP10.93□□□□□ -0.66
IFT20-207ENST00000578547 CLDN20P56880 219 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 SMIM11AP58511 58 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 RAC1P63000 192 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 TLE1Q04724 770 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 C19orf57Q0VDD7 668 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 LAPTM4AQ15012 233 aa10.93□□□□□ -0.66
IFT20-207ENST00000578547 EXOC3L2Q2M3D2 409 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms