RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 TMEM244Q5VVB8 128 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 OVCH1Q7RTY7 1134 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 MSRB3Q8IXL7 192 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 ASB17Q8WXJ9 295 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 SLC38A1Q9H2H9 487 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 FBRSQ9HAH7 460 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 SLC6A14Q9UN76 642 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 SLC5A10A0PJK1 596 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 TMEM82A0PJX8 343 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 UPK1AO00322 258 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 ZNF888P0CJ79 500 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-205ENST00000577827 ACRP10323 421 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 CAMLGP49069 296 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 ZNF41P51814 821 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-205ENST00000577827 CDK3Q00526 305 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 SORDQ00796 357 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 FOXK2Q01167 660 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 CLPPQ16740 277 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-205ENST00000577827 Q499Y3 187 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 PYCR3Q53H96 274 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 YIF1BQ5BJH7 314 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 MRPL2Q5T653 305 aaKnown RBP9.67□□□□□ -0.86
PTPRM-205ENST00000577827 ARHGAP40Q5TG30 622 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 TCTN3Q6NUS6 607 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 ZNF852Q6ZMS4 543 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 GPAT4Q86UL3 456 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 STEAP2Q8NFT2 490 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 OR10K1Q8NGX5 313 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 ARHGAP9Q9BRR9 750 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 HHLA2Q9UM44 414 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 TMEM212A6NML5 194 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 CPMP14384 443 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 TGM4P49221 684 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 ZMYND11Q15326 602 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 PRSS36Q5K4E3 855 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 SIGIRRQ6IA17 410 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 LPCAT3Q6P1A2 487 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 RTL10Q7L3V2 364 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 PXT1Q8NFP0 134 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 OR13C2Q8NGS9 318 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 CAPNS2Q96L46 248 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 SLC25A21Q9BQT8 299 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-205ENST00000577827 BCL2L10Q9HD36 194 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 HIF3AQ9Y2N7 669 aa9.67□□□□□ -0.86
PTPRM-205ENST00000577827 RAB3AP20336 220 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 GPLD1P80108 840 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 TDGQ13569 410 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 DGLUCYQ7Z3D6 616 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 GDF7Q7Z4P5 450 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 ZNF740Q8NDX6 193 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 MYLIPQ8WY64 445 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 PMM1Q92871 262 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 SFXN2Q96NB2 322 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 SLC17A9Q9BYT1 436 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 R3HDMLQ9H3Y0 253 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 ZNF701Q9NV72 531 aaPredicted RBP9.66□□□□□ -0.86
PTPRM-205ENST00000577827 KLRF1Q9NZS2 232 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 TAAR2Q9P1P5 351 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 A0A087WUU8 490 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 FZD6O60353 706 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 FGF9P31371 208 aaPredicted RBP9.66□□□□□ -0.86
PTPRM-205ENST00000577827 CCR6P51684 374 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 CLRN1P58418 232 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 PLCXD2Q0VAA5 305 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 HYAL2Q12891 473 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 KRBOX4Q5JUW0 171 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 EOGTQ5NDL2 527 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 ZBTB37Q5TC79 503 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 ACSM5Q6NUN0 579 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 C1orf94Q6P1W5 598 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 ZNF585AQ6P3V2 769 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 OR4K17Q8NGC6 315 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 OR52E1Q8NGJ3 308 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 STK35Q8TDR2 534 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 SYT3Q9BQG1 590 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 PTGES2Q9H7Z7 377 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 C2orf42Q9NWW7 574 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 GGT3PA6NGU5 568 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 A6NIZ1 184 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 OR2T1O43869 369 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 RAD51DO75771 328 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 GPR75O95800 540 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 KIR2DL3P43628 341 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 RAP1BP61224 184 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 RAP1AP62834 184 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 GLO1Q04760 184 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 CRMP1Q14194 572 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 NNATQ16517 81 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 NKPD1Q17RQ9 610 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 SPIN3Q5JUX0 258 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 B3GLCTQ6Y288 498 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 RFLNAQ6ZTI6 216 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 TAS1R1Q7RTX1 841 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 PRICKLE2Q7Z3G6 844 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 BPIFB2Q8N4F0 458 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 DUSP19Q8WTR2 217 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 HOXB13Q92826 284 aaPredicted RBP9.66□□□□□ -0.86
PTPRM-205ENST00000577827 MSLNLQ96KJ4 702 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 LRFN5Q96NI6 719 aa9.66□□□□□ -0.86
PTPRM-205ENST00000577827 SDHAF2Q9NX18 166 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms