RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 CAMK2AQ9UQM7 478 aa9.58□□□□□ -0.88
LITAF-216ENST00000574848 LIPT1Q9Y234 373 aa9.58□□□□□ -0.88
LITAF-216ENST00000574848 MYRFQ9Y2G1 1151 aa9.58□□□□□ -0.88
LITAF-216ENST00000574848 SAMHD1Q9Y3Z3 626 aaKnown RBP9.58□□□□□ -0.88
LITAF-216ENST00000574848 AKAP9Q99996 3911 aa9.58□□□□□ -0.88
LITAF-216ENST00000574848 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 IGLV3-32A0A0A0MS00 114 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 C2orf72A6NCS6 295 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 hCG_2039718K7EN88 272 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 M0QX08 132 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 HCRTR2O43614 444 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 SMNDC1O75940 238 aaKnown RBP eCLIP9.57□□□□□ -0.88
LITAF-216ENST00000574848 SOX30O94993 753 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 NKX2-2O95096 273 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 H6PDO95479 791 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 IL18BPO95998 194 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 IL2RAP01589 272 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 IFNW1P05000 195 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 NGFRP08138 427 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 NR2F1P10589 423 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 ZNF708P17019 499 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 MATN1P21941 496 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 LHX2P50458 406 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 PSMD4P55036 377 aaKnown RBP9.57□□□□□ -0.88
LITAF-216ENST00000574848 B3GALT5-AS1P59052 145 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 KRTAP10-9P60411 292 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 KCNJ10P78508 379 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 HPCAP84074 193 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 VLDLRP98155 873 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 PPP2R2BQ00005 443 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 GANABQ14697 944 aaKnown RBP9.57□□□□□ -0.88
LITAF-216ENST00000574848 TOMM20Q15388 145 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 DECR1Q16698 335 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 TNFAIP8L2Q6P589 184 aaPredicted RBP9.57□□□□□ -0.88
LITAF-216ENST00000574848 TTC33Q6PID6 262 aaPredicted RBP9.57□□□□□ -0.88
LITAF-216ENST00000574848 VTCN1Q7Z7D3 282 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 CDRT4Q8N9R6 151 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 SETD9Q8NE22 299 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 OR2M3Q8NG83 312 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 OR14L1PQ8NHC6 308 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 GIMAP5Q96F15 307 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 TMEM19Q96HH6 336 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 MS4A4EQ96PG1 132 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 OR51I1Q9H343 314 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 TAS2R10Q9NYW0 307 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 JKAMPQ9P055 326 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 CLCF1Q9UBD9 225 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 FOXD3Q9UJU5 478 aaPredicted RBP9.57□□□□□ -0.88
LITAF-216ENST00000574848 MRTO4Q9UKD2 239 aaKnown RBP9.57□□□□□ -0.88
LITAF-216ENST00000574848 ANKRD17O75179 2603 aaKnown RBP9.57□□□□□ -0.88
LITAF-216ENST00000574848 POLQO75417 2590 aa9.57□□□□□ -0.88
LITAF-216ENST00000574848 A0A0G2JPF8 293 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 HNRNPCL2B2RXH8 293 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 HNRNPCL3B7ZW38 293 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 SYT5O00445 386 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 HMGN4O00479 90 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 ZIC3O60481 467 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 PGM3O95394 542 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 CLPTM1O96005 669 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 TFPTP0C1Z6 253 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 HNRNPCL4P0DMR1 293 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 ETS2P15036 469 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 IGFBP5P24593 272 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 DPP4P27487 766 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 LCN1P31025 176 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 DSCR4P56555 118 aaPredicted RBP9.56□□□□□ -0.88
LITAF-216ENST00000574848 CLDN18P56856 261 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 SMIM11AP58511 58 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 BCL2A1Q16548 175 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 KCTD21Q4G0X4 260 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 ZCCHC12Q6PEW1 402 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 WDR53Q7Z5U6 358 aaPredicted RBP9.56□□□□□ -0.88
LITAF-216ENST00000574848 C8orf59Q8N0T1 100 aaPredicted RBP9.56□□□□□ -0.88
LITAF-216ENST00000574848 C9orf106Q8NAJ2 232 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 NUP43Q8NFH3 380 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 SLC38A5Q8WUX1 472 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 RNASE6Q93091 150 aaKnown RBP9.56□□□□□ -0.88
LITAF-216ENST00000574848 TAMM41Q96BW9 452 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 C7orf34Q96L11 122 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 TRIB1Q96RU8 372 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 TUBA1CQ9BQE3 449 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 ACTRT3Q9BYD9 372 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 RTN4RQ9BZR6 473 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 BCL2L10Q9HD36 194 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 UBAP1Q9NZ09 502 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 FLRT3Q9NZU0 649 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 PPP4R1LQ9P1A2 415 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 DKKL1Q9UK85 242 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 BLOC1S6Q9UL45 172 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 MED12Q93074 2177 aa9.56□□□□□ -0.88
LITAF-216ENST00000574848 FAM221AA4D161 298 aa9.55□□□□□ -0.88
LITAF-216ENST00000574848 A6NHS1 94 aa9.55□□□□□ -0.88
LITAF-216ENST00000574848 C17orf51A8MQB3 221 aa9.55□□□□□ -0.88
LITAF-216ENST00000574848 LINC01387J3KSC0 135 aa9.55□□□□□ -0.88
LITAF-216ENST00000574848 TNFRSF11BO00300 401 aa9.55□□□□□ -0.88
LITAF-216ENST00000574848 DLGAP1O14490 977 aa9.55□□□□□ -0.88
LITAF-216ENST00000574848 SCO2O43819 266 aa9.55□□□□□ -0.88
LITAF-216ENST00000574848 SNAP29O95721 258 aa9.55□□□□□ -0.88
LITAF-216ENST00000574848 AK1P00568 194 aa9.55□□□□□ -0.88
LITAF-216ENST00000574848 IGKV1D-16P01601 117 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms