RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SASH3O75995 380 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 PRKD3O94806 890 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 ANP32DO95626 131 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 PLAUP00749 431 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 ETFAP13804 333 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 PPP3CBP16298 524 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 SLC7A1P30825 629 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 HTR3AP46098 478 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 KCNJ5P48544 419 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 DSTNP60981 165 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 FADDQ13158 208 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 TSC22D1Q15714 1073 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 ZSWIM7Q19AV6 140 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 SYT14P1Q58G82 188 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 PRAMEF8Q5VWM4 474 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 PRAMEF7Q5VXH5 474 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 TMPPEQ6ZT21 453 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 BEND4Q6ZU67 534 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 SLC38A5Q8WUX1 472 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 ACTR6Q9GZN1 396 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 RAD21L1Q9H4I0 556 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 FANCFQ9NPI8 374 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 ZNF226Q9NYT6 803 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 CHRNA9Q9UGM1 479 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 C2CD3Q4AC94 2353 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 CASKO14936 926 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 DNPH1O43598 174 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 YES1P07947 543 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 THBS1P07996 1170 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 IL7RP16871 459 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 CRATP43155 626 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 DIO1P49895 249 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 MAP2K6P52564 334 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 CRISP3P54108 245 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 KEAP1Q14145 624 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 RGNQ15493 299 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 C6orf10Q5SRN2 563 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 MRPL2Q5T653 305 aaKnown RBP15.35■□□□□ 0.05
SMG6-212ENST00000573153 RNF220Q5VTB9 566 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 SLC2A7Q6PXP3 512 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 ATG4DQ86TL0 474 aaPredicted RBP15.35■□□□□ 0.05
SMG6-212ENST00000573153 STK32CQ86UX6 486 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 MSRB3Q8IXL7 192 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 PEX5LQ8IYB4 626 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 ZNF440Q8IYI8 595 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 C10orf111Q8N326 155 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 ZNF563Q8TA94 476 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 OR5B2Q96R09 309 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 OR11A1Q9GZK7 315 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 BCL2L10Q9HD36 194 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 PRSS50Q9UI38 385 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 GPR52Q9Y2T5 361 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 HDGFL3Q9Y3E1 203 aa15.35■□□□□ 0.05
SMG6-212ENST00000573153 IGKV3D-15A0A087WSY6 115 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 TRBV5-3A0A0A0MS03 114 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 A0A0G2JPF8 293 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 CDHR4A6H8M9 788 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 HNRNPCL2B2RXH8 293 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 HNRNPCL3B7ZW38 293 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 CLIC1O00299 241 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 HNRNPCL1O60812 293 aaKnown RBP15.34■□□□□ 0.05
SMG6-212ENST00000573153 PMS2P2O95744 297 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 FESP07332 822 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 NUDT7P0C024 238 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 HNRNPCL4P0DMR1 293 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 CD99P14209 185 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 ACAA2P42765 397 aaKnown RBP15.34■□□□□ 0.05
SMG6-212ENST00000573153 OR3A2P47893 321 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 CSNK2A1P68400 391 aaPredicted RBP15.34■□□□□ 0.05
SMG6-212ENST00000573153 H3F3AP84243 136 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 EPS8Q12929 822 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 SQLEQ14534 574 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 PDK3Q15120 406 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 LIN52Q52LA3 116 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 TMEM201Q5SNT2 666 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 FBXW10Q5XX13 1052 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 LILRB1Q8NHL6 650 aaPredicted RBP15.34■□□□□ 0.05
SMG6-212ENST00000573153 S100PBPQ96BU1 408 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 SPDL1Q96EA4 605 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 PIP5K1AQ99755 562 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 SIKE1Q9BRV8 207 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 A4GALTQ9NPC4 353 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 BEX4Q9NWD9 120 aaPredicted RBP15.34■□□□□ 0.05
SMG6-212ENST00000573153 SLC25A37Q9NYZ2 338 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 KLHL9Q9P2J3 617 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 OSGIN1Q9UJX0 560 aa15.34■□□□□ 0.05
SMG6-212ENST00000573153 SETD2Q9BYW2 2564 aaPredicted RBP15.33■□□□□ 0.05
SMG6-212ENST00000573153 CFAP73A6NFT4 308 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 ZNF724A8MTY0 619 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 ZNF208O43345 1280 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 EDF1O60869 148 aaKnown RBP15.33■□□□□ 0.04
SMG6-212ENST00000573153 BCHEP06276 602 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 IMPDH2P12268 514 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 COX5AP20674 150 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 RYKP34925 604 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 SLC1A3P43003 542 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 IDH2P48735 452 aaKnown RBP15.33■□□□□ 0.04
SMG6-212ENST00000573153 RIPPLY3P57055 190 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 ACKR1Q16570 336 aa15.33■□□□□ 0.04
SMG6-212ENST00000573153 BEX5Q5H9J7 111 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms