RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 UPB1Q9UBR1 384 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 TBK1Q9UHD2 729 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 KCNE5Q9UJ90 142 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 DNAJA2O60884 412 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 SLU7O95391 586 aaKnown RBP17.33■□□□□ 0.36
CCDC40-206ENST00000572083 C6orf47O95873 294 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 CSTAP01040 98 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 PROCP04070 461 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 KRT16P08779 473 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 ABHD2P08910 425 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 BCKDHAP12694 445 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 PGCP20142 388 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 SLC16A1P53985 500 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 ETF1P62495 437 aaKnown RBP17.33■□□□□ 0.36
CCDC40-206ENST00000572083 RPS26P62854 115 aaKnown RBP17.33■□□□□ 0.36
CCDC40-206ENST00000572083 C17orf78Q8N4C9 275 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 SDF2Q99470 211 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 OR11A1Q9GZK7 315 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 NMUR2Q9GZQ4 415 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 ADAM19Q9H013 955 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 MYOZ1Q9NP98 299 aaPredicted RBP17.33■□□□□ 0.36
CCDC40-206ENST00000572083 SLC7A10Q9NS82 523 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 ACER3Q9NUN7 267 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 DCDC2Q9UHG0 476 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 ATP6V1HQ9UI12 483 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 DCTN4Q9UJW0 460 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 TMED5Q9Y3A6 229 aa17.33■□□□□ 0.36
CCDC40-206ENST00000572083 SPIN1Q9Y657 262 aaPredicted RBP17.33■□□□□ 0.36
CCDC40-206ENST00000572083 AZIN1O14977 448 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 GLRA3O75311 464 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 PMS2P2O95744 297 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 IL2RGP31785 369 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 DNAJB13P59910 316 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 TSPO2Q5TGU0 170 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 C1orf162Q8NEQ5 155 aaPredicted RBP17.32■□□□□ 0.36
CCDC40-206ENST00000572083 PSMA8Q8TAA3 256 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 MZB1Q8WU39 189 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 OR5P2Q8WZ92 322 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 CCDC106Q9BWC9 280 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 PSMC3IPQ9P2W1 217 aaPredicted RBP17.32■□□□□ 0.36
CCDC40-206ENST00000572083 GIMAP2Q9UG22 337 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 CHRNA9Q9UGM1 479 aa17.32■□□□□ 0.36
CCDC40-206ENST00000572083 KLF11O14901 512 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 UGT2B17O75795 530 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 DDX5P17844 614 aaKnown RBP17.31■□□□□ 0.36
CCDC40-206ENST00000572083 SOAT1P35610 550 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 APOBEC1P41238 236 aaKnown RBP17.31■□□□□ 0.36
CCDC40-206ENST00000572083 MAGEA8P43361 318 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 OR2B6P58173 313 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 ZNF141Q15928 474 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 KLHL24Q6TFL4 600 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 SPATA19Q7Z5L4 167 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 DDIASQ8IXT1 998 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 SFXN5Q8TD22 340 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 SERHL2Q9H4I8 314 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 OXSMQ9NWU1 459 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 TMEFF2Q9UIK5 374 aaPredicted RBP17.31■□□□□ 0.36
CCDC40-206ENST00000572083 MKLN1Q9UL63 735 aa17.31■□□□□ 0.36
CCDC40-206ENST00000572083 A0A1W2PPM1 405 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 FCMRO60667 390 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 BCAS1O75363 584 aaPredicted RBP17.3■□□□□ 0.36
CCDC40-206ENST00000572083 CDH2P19022 906 aaPredicted RBP17.3■□□□□ 0.36
CCDC40-206ENST00000572083 CCNA2P20248 432 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 SERPINF1P36955 418 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 PRPS1P60891 318 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 TGFBR3Q03167 851 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 PTGR1Q14914 329 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 HIKESHIQ53FT3 197 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 EIF3MQ7L2H7 374 aaKnown RBP17.3■□□□□ 0.36
CCDC40-206ENST00000572083 CCDC63Q8NA47 563 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 NOA1Q8NC60 698 aaKnown RBP17.3■□□□□ 0.36
CCDC40-206ENST00000572083 ZNF540Q8NDQ6 660 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 ZNF563Q8TA94 476 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 BHLHE41Q9C0J9 482 aaPredicted RBP17.3■□□□□ 0.36
CCDC40-206ENST00000572083 CA10Q9NS85 328 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 SLC9A8Q9Y2E8 581 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 HDGFL3Q9Y3E1 203 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 DNAJC15Q9Y5T4 150 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 FLVCR1Q9Y5Y0 555 aa17.3■□□□□ 0.36
CCDC40-206ENST00000572083 IGHV1-18A0A0C4DH31 117 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 TMEM233B4DJY2 109 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 RIPK2O43353 540 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 PLIN3O60664 434 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 WNT11O96014 354 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 CHEK2O96017 543 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 APEX1P27695 318 aaKnown RBP17.29■□□□□ 0.36
CCDC40-206ENST00000572083 RYKP34925 604 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 KANK2Q63ZY3 851 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 VHLLQ6RSH7 139 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 RINLQ6ZS11 566 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 RNF165Q6ZSG1 346 aa17.29■□□□□ 0.36
CCDC40-206ENST00000572083 DYSFO75923 2080 aa17.28■□□□□ 0.36
CCDC40-206ENST00000572083 TMEM114B3SHH9 223 aa17.28■□□□□ 0.36
CCDC40-206ENST00000572083 CFLARO15519 480 aa17.28■□□□□ 0.36
CCDC40-206ENST00000572083 DNPH1O43598 174 aa17.28■□□□□ 0.36
CCDC40-206ENST00000572083 STX11O75558 287 aa17.28■□□□□ 0.36
CCDC40-206ENST00000572083 STAMBPO95630 424 aa17.28■□□□□ 0.36
CCDC40-206ENST00000572083 OR4A8P0C604 315 aa17.28■□□□□ 0.36
CCDC40-206ENST00000572083 MPGP29372 298 aa17.28■□□□□ 0.36
CCDC40-206ENST00000572083 RPL3P39023 403 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms