RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 FMO6PO60774 539 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 DNASE1P24855 282 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 HTR2AP28223 471 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 EPS8Q12929 822 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 PRAMEF20Q5VT98 475 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 HMBOX1Q6NT76 420 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 ZNF440Q8IYI8 595 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 LRTOMTQ8WZ04 291 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 ZNF524Q96C55 264 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 MBD6Q96DN6 1003 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 ARSGQ96EG1 525 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 PKP2Q99959 881 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 POLDIP3Q9BY77 421 aaKnown RBP12.43□□□□□ -0.42
RPAIN-209ENST00000571558 UCK2Q9BZX2 261 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 GSX1Q9H4S2 264 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-209ENST00000571558 YY1AP1Q9H869 796 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 DEPPQ9NTK1 212 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 STX18Q9P2W9 335 aaKnown RBP12.43□□□□□ -0.42
RPAIN-209ENST00000571558 TESQ9UGI8 421 aaKnown RBP12.43□□□□□ -0.42
RPAIN-209ENST00000571558 RIMS3Q9UJD0 308 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 A4GNTQ9UNA3 340 aa12.43□□□□□ -0.42
RPAIN-209ENST00000571558 H0Y3Z8 333 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 J3KTA2 159 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 GTPBP1O00178 669 aaKnown RBP12.42□□□□□ -0.42
RPAIN-209ENST00000571558 FAAHO00519 579 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 HCRTR2O43614 444 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 TRIM3O75382 744 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-209ENST00000571558 DIRAS1O95057 198 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 SNX4O95219 450 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 ATP6V1G2O95670 118 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 ITGA2P17301 1181 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 RHCEP18577 417 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 FUT4P22083 530 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 LTBQ06643 244 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 ATP6AP1Q15904 470 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 ZNF550Q7Z398 422 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 LSMEM1Q8N8F7 131 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 FADS6Q8N9I5 356 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 WDSUB1Q8N9V3 476 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 TOR1AIP2Q8NFQ8 470 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 NRGNQ92686 78 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 SH3YL1Q96HL8 342 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-209ENST00000571558 DHRS1Q96LJ7 313 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 RNPEPL1Q9HAU8 725 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 NTN4Q9HB63 628 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 TIMMDC1Q9NPL8 285 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 SACM1LQ9NTJ5 587 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 DNAJB9Q9UBS3 223 aa12.42□□□□□ -0.42
RPAIN-209ENST00000571558 NKX1-2Q9UD57 310 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-209ENST00000571558 CLOCKO15516 846 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 ZNHIT1O43257 154 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 LYPD3O95274 346 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 CST1P01037 141 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 THY1P04216 161 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 P04436 131 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 FCGR1AP12314 374 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 ANPEPP15144 967 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 CNR1P21554 472 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 FASP25445 335 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 YAP1P46937 504 aaKnown RBP12.41□□□□□ -0.42
RPAIN-209ENST00000571558 P2RX1P51575 399 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 ADAM8P78325 824 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 ENTPD8Q5MY95 495 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 OR5M10Q6IEU7 315 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 DEF8Q6ZN54 512 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 RANBP3LQ86VV4 465 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-209ENST00000571558 PQLC1Q8N2U9 271 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 ZFP62Q8NB50 900 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-209ENST00000571558 OR2M3Q8NG83 312 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 OR5W2Q8NH69 310 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 B4GALNT2Q8NHY0 566 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 TMEM41AQ96HV5 264 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 ZNF347Q96SE7 839 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 MCHR1Q99705 422 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 PIP5K1AQ99755 562 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 POLR2J2Q9GZM3 115 aaKnown RBP12.41□□□□□ -0.42
RPAIN-209ENST00000571558 POLR2J3Q9H1A7 115 aaKnown RBP12.41□□□□□ -0.42
RPAIN-209ENST00000571558 SDHAF3Q9NRP4 125 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 MAN2C1Q9NTJ4 1040 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 VNN3Q9NY84 501 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 PPP4R1LQ9P1A2 415 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 PRDM4Q9UKN5 801 aa12.41□□□□□ -0.42
RPAIN-209ENST00000571558 G3V3Y1 287 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 ETV2O00321 342 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-209ENST00000571558 SNPHO15079 494 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 CYP7B1O75881 506 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 SLC6A8P48029 635 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 DNASE1L1P49184 302 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 SUMO3P55854 103 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-209ENST00000571558 PMPCAQ10713 525 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 FOXO1Q12778 655 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 PIN1Q13526 163 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-209ENST00000571558 CMPK2Q5EBM0 449 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 TIGD3Q6B0B8 471 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 OR2T5Q6IEZ7 315 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 CCDC71Q8IV32 467 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-209ENST00000571558 TMCO5AQ8N6Q1 288 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 PIK3C3Q8NEB9 887 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 OR2T29Q8NH02 315 aa12.4□□□□□ -0.42
RPAIN-209ENST00000571558 GPR119Q8TDV5 335 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms