RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 RYKP34925 604 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 FOXG1P55316 489 aaPredicted RBP13.02□□□□□ -0.33
NDE1-203ENST00000570727 ABCE1P61221 599 aaKnown RBP13.02□□□□□ -0.33
NDE1-203ENST00000570727 DMTNQ08495 405 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 CASP8Q14790 479 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 EMBQ6PCB8 327 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 FRRS1Q6ZNA5 592 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 CXXC5Q7LFL8 322 aaKnown RBP13.02□□□□□ -0.33
NDE1-203ENST00000570727 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 CCDC103Q8IW40 242 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 AENQ8WTP8 325 aaKnown RBP13.02□□□□□ -0.33
NDE1-203ENST00000570727 OIT3Q8WWZ8 545 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 TMEM109Q9BVC6 243 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 DPY30Q9C005 99 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 CHRNA9Q9UGM1 479 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 SLC35A3Q9Y2D2 325 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 NOSIPQ9Y314 301 aaKnown RBP13.02□□□□□ -0.33
NDE1-203ENST00000570727 SLC25A15Q9Y619 301 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 E7EQL1 145 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 SERPINE1P05121 402 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 SLC16A1P53985 500 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 CDH11P55287 796 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 IRX1P78414 480 aaPredicted RBP13.01□□□□□ -0.33
NDE1-203ENST00000570727 KCNJ10P78508 379 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 H3F3AP84243 136 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 CHRNEQ04844 493 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 CHI3L2Q15782 390 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 ATAD3BQ5T9A4 648 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 ANXA8L1Q5VT79 327 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 C11orf71Q6IPW1 123 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 SSX8Q7RTT4 187 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 GRINAQ7Z429 371 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 OR52N5Q8NH56 324 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 SPATA3Q8NHX4 192 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 ZNF563Q8TA94 476 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 CNOT9Q92600 299 aaKnown RBP13.01□□□□□ -0.33
NDE1-203ENST00000570727 TESCQ96BS2 214 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 NEURL3Q96EH8 262 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 MUS81Q96NY9 551 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 SORT1Q99523 831 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 OR11A1Q9GZK7 315 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 ALG2Q9H553 416 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.01□□□□□ -0.33
NDE1-203ENST00000570727 EMC3Q9P0I2 261 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.01□□□□□ -0.33
NDE1-203ENST00000570727 HDGFL3Q9Y3E1 203 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 RAP2CQ9Y3L5 183 aa13.01□□□□□ -0.33
NDE1-203ENST00000570727 CIB4A0PJX0 185 aa13□□□□□ -0.33
NDE1-203ENST00000570727 CD5LO43866 347 aa13□□□□□ -0.33
NDE1-203ENST00000570727 RAD51DO75771 328 aa13□□□□□ -0.33
NDE1-203ENST00000570727 MYZAPP0CAP1 466 aa13□□□□□ -0.33
NDE1-203ENST00000570727 FKBP2P26885 142 aaKnown RBP13□□□□□ -0.33
NDE1-203ENST00000570727 TTKP33981 857 aa13□□□□□ -0.33
NDE1-203ENST00000570727 IDH2P48735 452 aaKnown RBP13□□□□□ -0.33
NDE1-203ENST00000570727 CLK1P49759 484 aaKnown RBP13□□□□□ -0.33
NDE1-203ENST00000570727 GABRA6Q16445 453 aa13□□□□□ -0.33
NDE1-203ENST00000570727 SPANXN4Q5MJ08 99 aa13□□□□□ -0.33
NDE1-203ENST00000570727 UBE2J2Q8N2K1 259 aa13□□□□□ -0.33
NDE1-203ENST00000570727 APH1AQ96BI3 265 aa13□□□□□ -0.33
NDE1-203ENST00000570727 RADILQ96JH8 1075 aa13□□□□□ -0.33
NDE1-203ENST00000570727 TEX37Q96LM6 180 aa13□□□□□ -0.33
NDE1-203ENST00000570727 HS6ST2Q96MM7 605 aa13□□□□□ -0.33
NDE1-203ENST00000570727 BARX1Q9HBU1 254 aaPredicted RBP13□□□□□ -0.33
NDE1-203ENST00000570727 EXOSC3Q9NQT5 275 aaKnown RBP13□□□□□ -0.33
NDE1-203ENST00000570727 ASB6Q9NWX5 421 aa13□□□□□ -0.33
NDE1-203ENST00000570727 TRAPPC4Q9Y296 219 aa13□□□□□ -0.33
NDE1-203ENST00000570727 SPIN1Q9Y657 262 aaPredicted RBP13□□□□□ -0.33
NDE1-203ENST00000570727 IGHV4-30-2A0A087WSY4 118 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 A0A096LNT2 108 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 A0A1W2PR80 420 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 CCT8L1PA6NM43 557 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 PDLIM1O00151 329 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 HMGN4O00479 90 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 AP3D1O14617 1153 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 GPR171O14626 319 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 BIRC5O15392 142 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 DNPH1O43598 174 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 TLX2O43763 284 aaPredicted RBP12.99□□□□□ -0.33
NDE1-203ENST00000570727 SSX4O60224 188 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 ITGA5P08648 1049 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 DHRS4L1P0CG22 281 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 IMPDH2P12268 514 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 CCNA2P20248 432 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 PTAFRP25105 342 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 CD40P25942 277 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 SLC1A6P48664 564 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 RPL14P50914 215 aaKnown RBP12.99□□□□□ -0.33
NDE1-203ENST00000570727 ZNF83P51522 516 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 OR2B6P58173 313 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 SPOCK1Q08629 439 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 SYPL1Q16563 259 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 GPAT3Q53EU6 434 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 AGAP6Q5VW22 663 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 TMEM108Q6UXF1 575 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 HIPK1Q86Z02 1210 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 PIAS4Q8N2W9 510 aaPredicted RBP12.99□□□□□ -0.33
NDE1-203ENST00000570727 ARFGAP2Q8N6H7 521 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 ANKFN1Q8N957 763 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 WDR31Q8NA23 367 aa12.99□□□□□ -0.33
NDE1-203ENST00000570727 VPS37AQ8NEZ2 397 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms