RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RNF115Q9Y4L5 304 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 COL6A5A8TX70 2615 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 YLPM1P49750 1951 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 DUXAA6NLW8 204 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 KIAA1324LA8MWY0 1029 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 E9PBE3 544 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 CLOCKO15516 846 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 NDUFS7O75251 213 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 CD8AP01732 235 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 IGHV3-9P01782 118 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 GUSBP08236 651 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 IL32P24001 234 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 PCSK6P29122 969 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 EPHA3P29320 983 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 RYKP34925 604 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 ITGADQ13349 1161 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 P2RY6Q15077 328 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 SYPL1Q16563 259 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 COX20Q5RI15 118 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 ANXA8L1Q5VT79 327 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 TMPPEQ6ZT21 453 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 Q6ZT83 130 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 EIF3MQ7L2H7 374 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 RNF130Q86XS8 419 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 ADGRG3Q86Y34 549 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 SLC43A2Q8N370 569 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 MAPK1IP1LQ8NDC0 245 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 VPS37AQ8NEZ2 397 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 LRRC8CQ8TDW0 803 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 SLC35A5Q9BS91 424 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 BDH2Q9BUT1 245 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 POTEKPQ9BYX7 375 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 SLC38A1Q9H2H9 487 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 WDR55Q9H6Y2 383 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 AIG1Q9NVV5 245 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 KLHL9Q9P2J3 617 aa12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 MAGED1Q9Y5V3 778 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 CHD3Q12873 2000 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-211ENST00000569653 CUBNO60494 3623 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 MXRA5Q9NR99 2828 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 IGKV3D-15A0A087WSY6 115 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 GOLGA8QA0A0J9YX86 632 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 GOLGA8OA6NCC3 632 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 ZNF724A8MTY0 619 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 SHISA9B4DS77 424 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 INAFM1C9JVW0 142 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 GOLGA8NF8WBI6 632 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 RPS4Y1P22090 263 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 CDKN1AP38936 164 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 MVDP53602 400 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 ATP5J2P56134 94 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 TNK1Q13470 666 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 NXNQ6DKJ4 435 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 MAVSQ7Z434 540 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 CCDC103Q8IW40 242 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 MAELQ96JY0 434 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 C7orf26Q96N11 449 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 HDHD5Q9BXW7 423 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 TRIM2Q9C040 744 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 EXD2Q9NVH0 621 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 BTNL2Q9UIR0 455 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 ADAM21Q9UKJ8 722 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 PCDHGB4Q9UN71 923 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 GPR45Q9Y5Y3 372 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 RTTNQ86VV8 2226 aa12.22□□□□□ -0.45
GTF3C1-211ENST00000569653 ARFGEF3Q5TH69 2177 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 ZC3H12DA2A288 527 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 SULT2B1O00204 365 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 ATP8B1O43520 1251 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 PGM3O95394 542 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 GSNP06396 782 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 CD3EP07766 207 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 IMPDH2P12268 514 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 IDO1P14902 403 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 PGCP20142 388 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 CCNA2P20248 432 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 PTNP21246 168 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 KHKP50053 298 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 RPS4XP62701 263 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 KCNJ10P78508 379 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 SPOCK1Q08629 439 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 ZNF672Q499Z4 452 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 ZNF433Q8N7K0 673 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 PNPT1Q8TCS8 783 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 HSD17B8Q92506 261 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 ZBTB18Q99592 522 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 TACO1Q9BSH4 297 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 FANCFQ9NPI8 374 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 EXOSC3Q9NQT5 275 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 POLE3Q9NRF9 147 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 INTS9Q9NV88 658 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 CHRNA9Q9UGM1 479 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 SLC35A3Q9Y2D2 325 aa12.21□□□□□ -0.45
GTF3C1-211ENST00000569653 A0A1W2PR80 420 aa12.2□□□□□ -0.46
GTF3C1-211ENST00000569653 TMEM72A0PK05 275 aa12.2□□□□□ -0.46
GTF3C1-211ENST00000569653 CCDC154A6NI56 674 aa12.2□□□□□ -0.46
GTF3C1-211ENST00000569653 AGAP5A6NIR3 686 aa12.2□□□□□ -0.46
GTF3C1-211ENST00000569653 IGHV4-39P01824 125 aa12.2□□□□□ -0.46
GTF3C1-211ENST00000569653 S100A3P33764 101 aa12.2□□□□□ -0.46
GTF3C1-211ENST00000569653 CHI3L1P36222 383 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms