RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 MST1LQ2TV78 715 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 FAM153CQ494X1 144 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 CASP12Q6UXS9 341 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 TRMT10CQ7L0Y3 403 aaKnown RBP13.55□□□□□ -0.24
PALB2-205ENST00000567003 PSMA8Q8TAA3 256 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 SFXN5Q8TD22 340 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 TWIST2Q8WVJ9 160 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 ARL8AQ96BM9 186 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 MUS81Q96NY9 551 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 PIMREGQ9BSJ6 248 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 SERINC1Q9NRX5 453 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 ACER3Q9NUN7 267 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 MALT1Q9UDY8 824 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 MKLN1Q9UL63 735 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 TMED5Q9Y3A6 229 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 PMF1-BGLAPU3KQ54 211 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 PDLIM1O00151 329 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 DNAJA2O60884 412 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 MRPL33O75394 65 aaKnown RBP13.54□□□□□ -0.24
PALB2-205ENST00000567003 UGT2B17O75795 530 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 CSTAP01040 98 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 KRT16P08779 473 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 NUDT7P0C024 238 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 APOBEC3AP31941 199 aaPredicted RBP13.54□□□□□ -0.24
PALB2-205ENST00000567003 OR2B6P58173 313 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 PCLAFQ15004 111 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 CCDC153Q494R4 210 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 AGR3Q8TD06 166 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 FOXN4Q96NZ1 517 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 TRMOQ9BU70 441 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 CCDC106Q9BWC9 280 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 NMUR2Q9GZQ4 415 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 FKRPQ9H9S5 495 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 SLC17A5Q9NRA2 495 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 MOKQ9UQ07 419 aa13.54□□□□□ -0.24
PALB2-205ENST00000567003 SMIM23A6NLE4 172 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 CFLARO15519 480 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 PEX11AO75192 247 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 CHEK2O96017 543 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 TGFAP01135 160 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 PGCP20142 388 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 RYKP34925 604 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 SLC16A1P53985 500 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 ZNF141Q15928 474 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 SWI5Q1ZZU3 235 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 CR1LQ2VPA4 569 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 UGT3A2Q3SY77 523 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 OR7E24Q6IFN5 339 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 RNF165Q6ZSG1 346 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 GSPT2Q8IYD1 628 aaKnown RBP13.53□□□□□ -0.24
PALB2-205ENST00000567003 PIGXQ8TBF5 258 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 SLC25A43Q8WUT9 341 aaPredicted RBP13.53□□□□□ -0.24
PALB2-205ENST00000567003 TMEM234Q8WY98 164 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 ZHX1-C8orf76Q96EF9 292 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 C16orf45Q96MC5 204 aaPredicted RBP13.53□□□□□ -0.24
PALB2-205ENST00000567003 SLC7A10Q9NS82 523 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 CHRNA9Q9UGM1 479 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 FKBP7Q9Y680 259 aa13.53□□□□□ -0.24
PALB2-205ENST00000567003 LRP5LA4QPB2 252 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 TMEM114B3SHH9 223 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 KLF11O14901 512 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 WIPF1O43516 503 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 SLU7O95391 586 aaKnown RBP13.52□□□□□ -0.25
PALB2-205ENST00000567003 PMS2P2O95744 297 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 SHBGP04278 402 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 BMP4P12644 408 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 CDH2P19022 906 aaPredicted RBP13.52□□□□□ -0.25
PALB2-205ENST00000567003 HNF1AP20823 631 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 MATN1P21941 496 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 CRHR1P34998 444 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 PGM1P36871 562 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 HBA1P69905 142 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 PLAURQ03405 335 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 IQCCQ4KMZ1 466 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 HIKESHIQ53FT3 197 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 TSPO2Q5TGU0 170 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 EIF3MQ7L2H7 374 aaKnown RBP13.52□□□□□ -0.25
PALB2-205ENST00000567003 CLECL1Q8IZS7 167 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 C4orf33Q8N1A6 199 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 ZNF563Q8TA94 476 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 SLC35G5Q96KT7 338 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 C3orf30Q96M34 536 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 VRK1Q99986 396 aaPredicted RBP13.52□□□□□ -0.25
PALB2-205ENST00000567003 BPESC1Q9GZL8 116 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 UPB1Q9UBR1 384 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 AMDHD2Q9Y303 409 aa13.52□□□□□ -0.25
PALB2-205ENST00000567003 CLDN24A6NM45 220 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 COPEO14579 308 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 GPR171O14626 319 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 STX11O75558 287 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 SKAP2O75563 359 aaPredicted RBP13.51□□□□□ -0.25
PALB2-205ENST00000567003 PGRP06401 933 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 ITGA2P17301 1181 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 DDX5P17844 614 aaKnown RBP13.51□□□□□ -0.25
PALB2-205ENST00000567003 IL2RGP31785 369 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 RPL3P39023 403 aaKnown RBP13.51□□□□□ -0.25
PALB2-205ENST00000567003 CCT5P48643 541 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 RUNX1T1Q06455 604 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 LSM12Q3MHD2 195 aaKnown RBP13.51□□□□□ -0.25
PALB2-205ENST00000567003 XKR7Q5GH72 579 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms