RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	ZNF559	Q9BR84	538 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	SFXN3	Q9BWM7	321 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	PINK1	Q9BXM7	581 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	ACTRT3	Q9BYD9	372 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	IQCG	Q9H095	443 aa	Known RBP	5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	QRSL1	Q9H0R6	528 aa	Known RBP	5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	SLC38A1	Q9H2H9	487 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	TMEM185B	Q9H7F4	350 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	TMBIM4	Q9HC24	238 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	SLC52A3	Q9NQ40	469 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	MARCO	Q9UEW3	520 aa	Predicted RBP	5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	FBXL7	Q9UJT9	491 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	CLEC4A	Q9UMR7	237 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	MXRA5	Q9NR99	2828 aa		5.76	□□□□□ -1.49
TCF4-233	ENST00000566376	DSPP	Q9NZW4	1301 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	GOLGA8Q	A0A0J9YX86	632 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	GOLGA8O	A6NCC3	632 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	SLC22A20	A6NK97	555 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	TTC36	A6NLP5	189 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ENO4	A6NNW6	628 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	GOLGA8N	F8WBI6	632 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	HMGN4	O00479	90 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	RNASET2	O00584	256 aa	Known RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	AP3D1	O14617	1153 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	TNFSF11	O14788	317 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ADAMDEC1	O15204	470 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	CXCL13	O43927	109 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	RAMP1	O60894	148 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	SS18L1	O75177	396 aa	Predicted RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	GCM2	O75603	506 aa	Predicted RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	DNAJC8	O75937	253 aa	Predicted RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ZWINT	O95229	277 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	HSPA4L	O95757	839 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	CHEK2	O96017	543 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	CHRM4	P08173	479 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ALOX5	P09917	674 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	PEPD	P12955	493 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	PRPS1L1	P21108	318 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	AGTR1	P30556	359 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	KRT20	P35900	424 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	PGM1	P36871	562 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	KIR2DL3	P43628	341 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	RPL14	P50914	215 aa	Known RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	C17orf67	Q0P5P2	114 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	RCAN2	Q14206	197 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ZNF141	Q15928	474 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ZNF239	Q16600	458 aa	Known RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	FAM174B	Q3ZCQ3	159 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	TM4SF20	Q53R12	229 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	TMEM177	Q53S58	311 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	PDZK1	Q5T2W1	519 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	CPTP	Q5TA50	214 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ZCCHC12	Q6PEW1	402 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ENPP6	Q6UWR7	440 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	C6orf120	Q7Z4R8	191 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	TMEM200A	Q86VY9	491 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	CXorf67	Q86X51	503 aa	Predicted RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	GRAMD2A	Q8IUY3	354 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	WDR75	Q8IWA0	830 aa	Known RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	MSRB3	Q8IXL7	192 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ANKRD42	Q8N9B4	389 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	OR56A1	Q8NGH5	318 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	OR10D3	Q8NH80	312 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	PPP1R14C	Q8TAE6	165 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	GPR119	Q8TDV5	335 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ABHD3	Q8WU67	409 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	JADE3	Q92613	823 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	SLC35G5	Q96KT7	338 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ZFP3	Q96NJ6	502 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	CCDC115	Q96NT0	180 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	RBM24	Q9BX46	236 aa	Known RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	TBL1XR1	Q9BZK7	514 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	CDIP1	Q9H305	208 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	OR51I1	Q9H343	314 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	EML4	Q9HC35	981 aa	Known RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	SLCO1B3	Q9NPD5	702 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	UBQLN4	Q9NRR5	601 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ASH2L	Q9UBL3	628 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ST6GALNAC2	Q9UJ37	374 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	PACSIN3	Q9UKS6	424 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	CARD8	Q9Y2G2	431 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	PLEKHA6	Q9Y2H5	1048 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ZNF175	Q9Y473	711 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	ATP23	Q9Y6H3	246 aa		5.75	□□□□□ -1.49
TCF4-233	ENST00000566376	TRBV5-3	A0A0A0MS03	114 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	IGHV3-15	A0A0B4J1V0	119 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	SH3D21	A4FU49	640 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376		E9PBE3	544 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	SMAD9	O15198	467 aa	Known RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	CYP7B1	O75881	506 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	OR12D1	P0DN82	309 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	DDX5	P17844	614 aa	Known RBP	5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	CD53	P19397	219 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	CAPN3	P20807	821 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	SOAT1	P35610	550 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	CPOX	P36551	454 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	PCYT1A	P49585	367 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	SLC18A1	P54219	525 aa		5.74	□□□□□ -1.49
TCF4-233	ENST00000566376	ATP12A	P54707	1039 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms