RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 EIF1BO60739 113 aaKnown RBP13.28□□□□□ -0.28
SPG7-210ENST00000564409 PGM3O95394 542 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 KRT75O95678 551 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 LY6G6DO95868 133 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 IL6P05231 212 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 ALDOCP09972 364 aaKnown RBP13.28□□□□□ -0.28
SPG7-210ENST00000564409 IDO1P14902 403 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 GGT1P19440 569 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 CASP9P55211 416 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 ATP5J2P56134 94 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 UFM1P61960 85 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 FUT5Q11128 374 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 PPA1Q15181 289 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 ZSWIM7Q19AV6 140 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 ATG16L1Q676U5 607 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 RNF130Q86XS8 419 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 ADGRG3Q86Y34 549 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 ZNF440Q8IYI8 595 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 ZNF300Q96RE9 604 aaPredicted RBP13.28□□□□□ -0.28
SPG7-210ENST00000564409 GRIP2Q9C0E4 1043 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 CTPS2Q9NRF8 586 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 GPR45Q9Y5Y3 372 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 CSPG4Q6UVK1 2322 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 HEATR1Q9H583 2144 aaKnown RBP13.27□□□□□ -0.28
SPG7-210ENST00000564409 VPS13CQ709C8 3753 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 TLN2Q9Y4G6 2542 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 OVOL3O00110 214 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 ZNF208O43345 1280 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 SNNO75324 88 aaPredicted RBP13.27□□□□□ -0.29
SPG7-210ENST00000564409 DBIP07108 87 aaKnown RBP13.27□□□□□ -0.29
SPG7-210ENST00000564409 RYKP34925 604 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 POLR2HP52434 150 aaKnown RBP13.27□□□□□ -0.29
SPG7-210ENST00000564409 CHRNEQ04844 493 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 ZNF672Q499Z4 452 aaPredicted RBP13.27□□□□□ -0.29
SPG7-210ENST00000564409 FBXW9Q5XUX1 488 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 SEZ6L2Q6UXD5 910 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 ZNF621Q6ZSS3 439 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 OLIG3Q7RTU3 272 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 LILRB1Q8NHL6 650 aaPredicted RBP13.27□□□□□ -0.29
SPG7-210ENST00000564409 GTPBP3Q969Y2 492 aaKnown RBP13.27□□□□□ -0.29
SPG7-210ENST00000564409 APH1AQ96BI3 265 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 DDIT4LQ96D03 193 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 ZG16BQ96DA0 208 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 TEX37Q96LM6 180 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 SLC38A1Q9H2H9 487 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 FAIMQ9NVQ4 179 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 THUMPD1Q9NXG2 353 aaKnown RBP13.27□□□□□ -0.29
SPG7-210ENST00000564409 CALML5Q9NZT1 146 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 TMEM181Q9P2C4 612 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 PRSS50Q9UI38 385 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 LAMP3Q9UQV4 416 aa13.27□□□□□ -0.29
SPG7-210ENST00000564409 NOSIPQ9Y314 301 aaKnown RBP13.27□□□□□ -0.29
SPG7-210ENST00000564409 GOLGA8QA0A0J9YX86 632 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 A0A1W2PP18 115 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 TMEM120BA0PK00 339 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 PRAMEF27A3QJZ7 478 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 GOLGA8OA6NCC3 632 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 OR5H1A6NKK0 313 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 ZNF716A6NP11 495 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 GOLGA8NF8WBI6 632 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 RFXANKO14593 260 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 CLOCKO15516 846 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 LYZL6O75951 148 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 DANCRP0C864 163 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 ZCCHC18P0CG32 403 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 NR2F1P10589 423 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 IL7RP16871 459 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 RPS4Y1P22090 263 aaKnown RBP13.26□□□□□ -0.29
SPG7-210ENST00000564409 IGHV1-2P23083 117 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 SLC1A3P43003 542 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 IDH2P48735 452 aaKnown RBP13.26□□□□□ -0.29
SPG7-210ENST00000564409 WDR4P57081 412 aaKnown RBP13.26□□□□□ -0.29
SPG7-210ENST00000564409 SLC35A1P78382 337 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 H3F3AP84243 136 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 BSPH1Q075Z2 132 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 TSC22D1Q15714 1073 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 GSTA3Q16772 222 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 PDCD4Q53EL6 469 aaKnown RBP13.26□□□□□ -0.29
SPG7-210ENST00000564409 OR7E24Q6IFN5 339 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 ALKBH2Q6NS38 261 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 MSANTD1Q6ZTZ1 278 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 PEX5LQ8IYB4 626 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 CIARTQ8N365 385 aaPredicted RBP13.26□□□□□ -0.29
SPG7-210ENST00000564409 ZNF433Q8N7K0 673 aaPredicted RBP13.26□□□□□ -0.29
SPG7-210ENST00000564409 ANKRD42Q8N9B4 389 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 SMAP2Q8WU79 429 aaPredicted RBP13.26□□□□□ -0.29
SPG7-210ENST00000564409 WDR60Q8WVS4 1066 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 CNOT9Q92600 299 aaKnown RBP13.26□□□□□ -0.29
SPG7-210ENST00000564409 ARL5BQ96KC2 179 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 NAA11Q9BSU3 229 aaPredicted RBP13.26□□□□□ -0.29
SPG7-210ENST00000564409 TRIM2Q9C040 744 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 PIF1Q9H611 641 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 PARPBPQ9NWS1 579 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 ASB6Q9NWX5 421 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 PLCE1Q9P212 2302 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 MALT1Q9UDY8 824 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 MGAT4BQ9UQ53 548 aa13.26□□□□□ -0.29
SPG7-210ENST00000564409 FN1P02751 2386 aaKnown RBP13.25□□□□□ -0.29
SPG7-210ENST00000564409 TMED7-TICAM2A0A0A6YYA0 188 aa13.25□□□□□ -0.29
SPG7-210ENST00000564409 DPRXA6NFQ7 191 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms