RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 AP4B1Q9Y6B7 739 aa13.98□□□□□ -0.17
CDH11-209ENST00000564317 CFAP46Q8IYW2 2715 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 A0A0J9YW62 118 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 ZC3H12DA2A288 527 aaKnown RBP13.97□□□□□ -0.17
CDH11-209ENST00000564317 OR14I1A6ND48 311 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 SEC14L5O43304 696 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 CHP2O43745 196 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 GPIP06744 558 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 CXCR1P25024 350 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 SFTPDP35247 375 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 ACTR3P61158 418 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 SRYQ05066 204 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 CHRNB3Q05901 458 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 FOXD4Q12950 439 aaPredicted RBP13.97□□□□□ -0.17
CDH11-209ENST00000564317 MRPL49Q13405 166 aaKnown RBP13.97□□□□□ -0.17
CDH11-209ENST00000564317 CTU2Q2VPK5 515 aaKnown RBP13.97□□□□□ -0.17
CDH11-209ENST00000564317 FAM98BQ52LJ0 330 aaKnown RBP13.97□□□□□ -0.17
CDH11-209ENST00000564317 EMC4Q5J8M3 183 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 SWT1Q5T5J6 900 aaKnown RBP13.97□□□□□ -0.17
CDH11-209ENST00000564317 C3orf33Q6P1S2 294 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 ZNF605Q86T29 641 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 UBQLNLQ8IYU4 475 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 OFCC1Q8IZS5 231 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 LILRA2Q8N149 483 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 OR5M9Q8NGP3 310 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 FAM57AQ8TBR7 257 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 RNF217Q8TC41 542 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 SLC38A4Q969I6 547 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 DNAJA3Q96EY1 480 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 RSRC1Q96IZ7 334 aaKnown RBP13.97□□□□□ -0.17
CDH11-209ENST00000564317 ADGRG7Q96K78 797 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 PRDM14Q9GZV8 571 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 DENND2DQ9H6A0 471 aaPredicted RBP13.97□□□□□ -0.17
CDH11-209ENST00000564317 COQ10BQ9H8M1 238 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 SERINC1Q9NRX5 453 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 PNPLA3Q9NST1 481 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 AURKCQ9UQB9 309 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 ZNF835Q9Y2P0 537 aa13.97□□□□□ -0.17
CDH11-209ENST00000564317 SMG1Q96Q15 3661 aaKnown RBP13.96□□□□□ -0.17
CDH11-209ENST00000564317 A0A087WUJ7 227 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 ELOA3DA6NLF2 546 aaPredicted RBP13.96□□□□□ -0.17
CDH11-209ENST00000564317 BCKDKO14874 412 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 RAP2AP10114 183 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 PNMTP11086 282 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 UMPSP11172 480 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 CPN1P15169 458 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 ABOP16442 354 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 RHCEP18577 417 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 BCL2A1Q16548 175 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 ELOA3BQ3SY89 546 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 TMEM176BQ3YBM2 270 aaPredicted RBP13.96□□□□□ -0.17
CDH11-209ENST00000564317 SYT14P1Q58G82 188 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 C1QL3Q5VWW1 255 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 LINC00114Q6XXX2 140 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 PIWIL3Q7Z3Z3 882 aaKnown RBP13.96□□□□□ -0.17
CDH11-209ENST00000564317 CD163Q86VB7 1156 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 CYP4Z1Q86W10 505 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 P3H2Q8IVL5 708 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 NKAIN4Q8IVV8 208 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 PIK3C3Q8NEB9 887 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 ELOA3Q8NG57 546 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 POP5Q969H6 163 aaKnown RBP13.96□□□□□ -0.17
CDH11-209ENST00000564317 ARL5BQ96KC2 179 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 DHRS1Q96LJ7 313 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 KLHL15Q96M94 604 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 PIP5K1AQ99755 562 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 CHID1Q9BWS9 393 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 CCM2LQ9NUG4 571 aaPredicted RBP13.96□□□□□ -0.17
CDH11-209ENST00000564317 SELENONQ9NZV5 590 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 CAMK2AQ9UQM7 478 aa13.96□□□□□ -0.17
CDH11-209ENST00000564317 A0A1W2PNR3 127 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 H0Y3Z8 333 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 EIF1AYO14602 144 aaKnown RBP13.95□□□□□ -0.18
CDH11-209ENST00000564317 TNFSF11O14788 317 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 ZNF208O43345 1280 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 KALRNO60229 2985 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 SLC19A2O60779 497 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 NPIPB7O75200 414 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 FKBP6O75344 327 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 TPOP07202 933 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 TFPIP10646 304 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 ITGA2P17301 1181 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 EGR4Q05215 589 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.95□□□□□ -0.18
CDH11-209ENST00000564317 GXYLT1Q4G148 440 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 WLSQ5T9L3 541 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 Q6ZPB1 254 aaPredicted RBP13.95□□□□□ -0.18
CDH11-209ENST00000564317 PAPD5Q8NDF8 572 aaKnown RBP13.95□□□□□ -0.18
CDH11-209ENST00000564317 SLC25A43Q8WUT9 341 aaPredicted RBP13.95□□□□□ -0.18
CDH11-209ENST00000564317 TMEM255BQ8WV15 326 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 DUS3LQ96G46 650 aaKnown RBP13.95□□□□□ -0.18
CDH11-209ENST00000564317 TUBA1CQ9BQE3 449 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 ZNF426Q9BUY5 554 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 FNDC11Q9BVV2 318 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 NMNAT1Q9HAN9 279 aaPredicted RBP13.95□□□□□ -0.18
CDH11-209ENST00000564317 VNN3Q9NY84 501 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 FAM32AQ9Y421 112 aaKnown RBP13.95□□□□□ -0.18
CDH11-209ENST00000564317 TESMINQ9Y4I5 508 aa13.95□□□□□ -0.18
CDH11-209ENST00000564317 SPIN1Q9Y657 262 aaPredicted RBP13.95□□□□□ -0.18
CDH11-209ENST00000564317 DNAJC13O75165 2243 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms