RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 IGKV3-11P04433 115 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 DBIP07108 87 aaKnown RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 UMODP07911 640 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 GUSBP08236 651 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 CT45A8P0DMV1 189 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 CT45A9P0DMV2 189 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 ACP2P11117 423 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 FCGR1AP12314 374 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 ETS2P15036 469 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 NAGAP17050 411 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 MALP21145 153 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 FASP25445 335 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 IL12BP29460 328 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 LCN1P31025 176 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 PIGAP37287 484 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 MAP3K8P41279 467 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 RFX3P48380 749 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 GPR143P51810 404 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 NR0B1P51843 470 aaKnown RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 ARHGDIAP52565 204 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 PNLIPRP2P54317 469 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 SLC26A5P58743 744 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 RPP38P78345 283 aaKnown RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 CCNIQ14094 377 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 EFR3AQ14156 821 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 GPR68Q15743 365 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 DUSP5Q16690 384 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 BTBD16Q32M84 506 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 CYBRD1Q53TN4 286 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 CT45A2Q5DJT8 189 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 ZNF311Q5JNZ3 666 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 DCST2Q5T1A1 773 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 IRAK1BP1Q5VVH5 260 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 PLAG1Q6DJT9 500 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 HEPHL1Q6MZM0 1159 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 FAM198BQ6UWH4 519 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 AMIGO2Q86SJ2 522 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 CYP4Z1Q86W10 505 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 MARCH9Q86YJ5 346 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 SLC34A3Q8N130 599 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 SLC15A4Q8N697 577 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 ANKFN1Q8N957 763 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 ZNF527Q8NB42 609 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 C17orf47Q8NEP4 570 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 NFAM1Q8NET5 270 aaPredicted RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 OR52P1PQ8NH57 321 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 NUBPLQ8TB37 319 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 FAM110BQ8TC76 370 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 SLC22A8Q8TCC7 542 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 ELP5Q8TE02 316 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 CANT1Q8WVQ1 401 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 PIK3R3Q92569 461 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 DPF1Q92782 380 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 PROX1Q92786 737 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 ADIPOR1Q96A54 375 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 C8orf44Q96CB5 159 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 TMCO6Q96DC7 493 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 NXPE2Q96DL1 559 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 C1GALT1C1Q96EU7 318 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 SLC47A1Q96FL8 570 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 DUS3LQ96G46 650 aaKnown RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 RMND5BQ96G75 393 aaPredicted RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 ZNF354BQ96LW1 612 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 FER1L6-AS2Q96M78 137 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 VSTM2LQ96N03 204 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 COL21A1Q96P44 957 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 GAL3ST4Q96RP7 486 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 VRK1Q99986 396 aaPredicted RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 TREX2Q9BQ50 279 aaPredicted RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 DOHHQ9BU89 302 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 PINK1Q9BXM7 581 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 DPH1Q9BZG8 443 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 WWTR1Q9GZV5 400 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 MAGIXQ9H6Y5 334 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 HHATLQ9HCP6 504 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 SERTAD4Q9NUC0 356 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 ARMC1Q9NVT9 282 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 MKLN1Q9UL63 735 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 SLC45A2Q9UMX9 530 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 PPIEQ9UNP9 301 aaKnown RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 FAM32AQ9Y421 112 aaKnown RBP4.23□□□□□ -1.73
CDR2-203ENST00000563573 NEUROG3Q9Y4Z2 214 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 CLDN16Q9Y5I7 305 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 HS3ST3B1Q9Y662 390 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 KCNE3Q9Y6H6 103 aa4.23□□□□□ -1.73
CDR2-203ENST00000563573 KNTC1P50748 2209 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 GVINP1Q7Z2Y8 2422 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 CACNA1AO00555 2505 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 TRBV11-1A0A0K0K1C0 115 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 GXYLT2A0PJZ3 443 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 FRG2CA6NGY1 282 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 KRTAP29-1A8MX34 341 aaPredicted RBP4.22□□□□□ -1.73
CDR2-203ENST00000563573 H0Y3Z8 333 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 H3BML4 177 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 GTPBP1O00178 669 aaKnown RBP4.22□□□□□ -1.73
CDR2-203ENST00000563573 SOCS6O14544 535 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 AP3D1O14617 1153 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 TP53I11O14683 189 aa4.22□□□□□ -1.73
CDR2-203ENST00000563573 TO15178 435 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms