RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ASB18Q6ZVZ8 466 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 H2BFWTQ7Z2G1 175 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 NUFIP2Q7Z417 695 aaKnown RBP4.35□□□□□ -1.71
SMG1-207ENST00000563235 TMEM144Q7Z5S9 345 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 SPPL2CQ8IUH8 684 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 CROCCP3Q8IVE0 287 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 MFSD9Q8NBP5 474 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 LGALS14Q8TCE9 139 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 LENG1Q96BZ8 264 aaPredicted RBP4.35□□□□□ -1.71
SMG1-207ENST00000563235 C6orf50Q9HD87 102 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 ICAM5Q9UMF0 924 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 PRPF19Q9UMS4 504 aaKnown RBP4.35□□□□□ -1.71
SMG1-207ENST00000563235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMG1-207ENST00000563235 MAP3K2Q9Y2U5 619 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 FAM96BQ9Y3D0 163 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 A0A1B0GVI7 797 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 A0A1W2PPV9 198 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 TCRBV5S2A0A599 114 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 ZMPSTE24O75844 475 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 OAS1P00973 400 aaKnown RBP4.35□□□□□ -1.71
SMG1-207ENST00000563235 CSN3P07498 182 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 SP9P0CG40 484 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 CCKBRP32239 447 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 MAGEA3P43357 314 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 GLUD2P49448 558 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 CCR6P51684 374 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 TPTEP56180 551 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 CLDN18P56856 261 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 KCNK10P57789 538 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 NXPH1P58417 271 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 CXADRP78310 365 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 ZXDBP98169 803 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 CDR2Q01850 454 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 MYL5Q02045 173 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 OC90Q02509 493 aaPredicted RBP4.35□□□□□ -1.71
SMG1-207ENST00000563235 TLE3Q04726 772 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 TLE4Q04727 773 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 TIGD5Q53EQ6 642 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 NKAPLQ5M9Q1 402 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 BICRALQ6AI39 1079 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 BTNL3Q6UXE8 466 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 SLC35F6Q8N357 371 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 PIGXQ8TBF5 258 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 APH1BQ8WW43 257 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 APH1AQ96BI3 265 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 HSPA12BQ96MM6 686 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 TMEM56Q96MV1 263 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 ZFP3Q96NJ6 502 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 SNX18Q96RF0 628 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 IL4I1Q96RQ9 567 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 PFDN5Q99471 154 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 SLC38A3Q99624 504 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 COPS8Q99627 209 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 C16orf70Q9BSU1 422 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 NDUFAF3Q9BU61 184 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 MRI1Q9BV20 369 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 SLC19A3Q9BZV2 496 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 GSKIPQ9P0R6 139 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 GMPR2Q9P2T1 348 aaKnown RBP4.35□□□□□ -1.71
SMG1-207ENST00000563235 EPHA6Q9UF33 1036 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 SLC25A13Q9UJS0 675 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 GOLT1BQ9Y3E0 138 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 CEPT1Q9Y6K0 416 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 TMEM56-RWDD3S4R434 201 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 USP42Q9H9J4 1324 aaKnown RBP4.35□□□□□ -1.71
SMG1-207ENST00000563235 RTL9Q8NET4 1388 aa4.35□□□□□ -1.71
SMG1-207ENST00000563235 EVPLQ92817 2033 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 PHRF1Q9P1Y6 1649 aaKnown RBP4.34□□□□□ -1.71
SMG1-207ENST00000563235 DDX60Q8IY21 1712 aaKnown RBP4.34□□□□□ -1.71
SMG1-207ENST00000563235 MYH7P12883 1935 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 C9J4A7 227 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 F5H5T6 163 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 XRCC3O43542 346 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 SYNGR3O43761 229 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 SRPX2O60687 465 aaPredicted RBP4.34□□□□□ -1.71
SMG1-207ENST00000563235 NR3C1P04150 777 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 ALDOBP05062 364 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 NELFEP18615 380 aaKnown RBP4.34□□□□□ -1.71
SMG1-207ENST00000563235 BCKDHBP21953 392 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 EPHA2P29317 976 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 TALDO1P37837 337 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 PMELP40967 661 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 CYB561P49447 251 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 AP2S1P53680 142 aaPredicted RBP4.34□□□□□ -1.71
SMG1-207ENST00000563235 NCALDP61601 193 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 GUCY2DQ02846 1103 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 DLG1Q12959 904 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 CCNIQ14094 377 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 ZNF74Q16587 644 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 CNPY1Q3B7I2 92 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 C19orf54Q5BKX5 351 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 SAMD4BQ5PRF9 694 aaKnown RBP4.34□□□□□ -1.71
SMG1-207ENST00000563235 TRIQKQ629K1 86 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 RPL13AP3Q6NVV1 102 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 PNCKQ6P2M8 343 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 ADGRF3Q8IZF5 1079 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 C8orf31Q8N9H6 132 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 SLC38A9Q8NBW4 561 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 MRAPQ8TCY5 172 aa4.34□□□□□ -1.71
SMG1-207ENST00000563235 UBASH3BQ8TF42 649 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms