RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 KRCC1Q9NPI7 259 aaPredicted RBP6.87□□□□□ -1.31
TPM1-231ENST00000561395 TUBA8Q9NY65 449 aaPredicted RBP6.87□□□□□ -1.31
TPM1-231ENST00000561395 CNIH4Q9P003 139 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 PADI1Q9ULC6 663 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 RNF6Q9Y252 685 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 HS3ST3B1Q9Y662 390 aa6.87□□□□□ -1.31
TPM1-231ENST00000561395 HEATR5AQ86XA9 2040 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 H3BN98 237 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 MKRN2OSH3BPM6 223 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 SOCS6O14544 535 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 ADAM10O14672 748 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 ZNF264O43296 627 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 WBP4O75554 376 aaKnown RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 ZFAND5O76080 213 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 OR6B1O95007 311 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 ANGPTL1O95841 491 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 F12P00748 615 aaPredicted RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 IGHEP01854 428 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 TFAP2AP05549 437 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 IGFBP1P08833 259 aaPredicted RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 PRKAR1AP10644 381 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 GABRB1P18505 474 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 PTNP21246 168 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 POU1F1P28069 291 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 EVI2BP34910 448 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 STAT5AP42229 794 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 RBM34P42696 430 aaKnown RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 GPR4P46093 362 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 IDH2P48735 452 aaKnown RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 GTF2A1P52655 376 aaPredicted RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 CDH15P55291 814 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 CDC42P60953 191 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 CXCR4P61073 352 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 TUBA4AP68366 448 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 TEKQ02763 1124 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 ZNF117Q03924 483 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 CDC20Q12834 499 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 PTGES3Q15185 160 aaKnown RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 EXT1Q16394 746 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 CRTC2Q53ET0 693 aaPredicted RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 ALG10BQ5I7T1 473 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 SLX4IPQ5VYV7 408 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 TMEM236Q5W0B7 351 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 C12orf73Q69YU5 71 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 ZNF773Q6PK81 442 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 C16orf47Q6ZP98 133 aaPredicted RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 RASSF6Q6ZTQ3 369 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 RRM2BQ7LG56 351 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 MEX3DQ86XN8 651 aaKnown RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 NRMQ8IXM6 262 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 RNF113BQ8IZP6 322 aaKnown RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 NLGN4XQ8N0W4 816 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 DEPDC4Q8N2C3 294 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 GATSQ8NAP1 163 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 GALNT11Q8NCW6 608 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 PFN4Q8NHR9 129 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 RHOXF1Q8NHV9 184 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 M1APQ8TC57 530 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 PHOSPHO1Q8TCT1 267 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 ELP5Q8TE02 316 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 THAP3Q8WTV1 239 aaPredicted RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 APH1BQ8WW43 257 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 HGDQ93099 445 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 C3orf49Q96BT1 292 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 MPP4Q96JB8 637 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 IMMP1LQ96LU5 166 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 HS6ST2Q96MM7 605 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 ZNF426Q9BUY5 554 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 DEFB126Q9BYW3 111 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 TBL1XR1Q9BZK7 514 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 LAT2Q9GZY6 243 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 LIN28AQ9H9Z2 209 aaKnown RBP6.86□□□□□ -1.31
TPM1-231ENST00000561395 SLC25A19Q9HC21 320 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 IMPAD1Q9NX62 359 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 SELENONQ9NZV5 590 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 RPS6KB2Q9UBS0 482 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 BLOC1S6Q9UL45 172 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 TCFL5Q9UL49 500 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 TMEM5Q9Y2B1 443 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 CARD8Q9Y2G2 431 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 NPFFR2Q9Y5X5 522 aa6.86□□□□□ -1.31
TPM1-231ENST00000561395 AKAP9Q99996 3911 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 CSMD2Q7Z408 3487 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 WIPF3A6NGB9 483 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 UNC119BA6NIH7 251 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 M0R129 80 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 GTPBP1O00178 669 aaKnown RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 WWP2O00308 870 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 CDC42EP2O14613 210 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 NDUFB5O43674 189 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 XPNPEP2O43895 674 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 FADS1O60427 444 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 EIF4E2O60573 245 aaKnown RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 ZNF354AO60765 605 aaPredicted RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 LINGO3P0C6S8 592 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 NAGAP17050 411 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 TCN2P20062 427 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 MAKP20794 623 aa6.85□□□□□ -1.31
TPM1-231ENST00000561395 ENDOUP21128 410 aaKnown RBP6.85□□□□□ -1.31
TPM1-231ENST00000561395 FMO3P31513 532 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms