RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 THUMPD3Q9BV44 507 aaKnown RBP10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 C12orf65Q9H3J6 166 aaKnown RBP10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 ATAD3AQ9NVI7 634 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 EMC3Q9P0I2 261 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 LPAR3Q9UBY5 353 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 TRAF6Q9Y4K3 522 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 SLC25A15Q9Y619 301 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 YLPM1P49750 1951 aaKnown RBP10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 CIB4A0PJX0 185 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 DUXAA6NLW8 204 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF716A6NP11 495 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 SULT2B1O00204 365 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 PIP5K1BO14986 540 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 RAD51DO75771 328 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 C6orf47O95873 294 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 AK1P00568 194 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 VIMP08670 466 aaKnown RBP10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 KRT4P19013 534 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 CASP9P55211 416 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 PTGR1Q14914 329 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 PCLAFQ15004 111 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 SYT14P1Q58G82 188 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 PDZK1Q5T2W1 519 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 ABLIM2Q6H8Q1 611 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 OR7E24Q6IFN5 339 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 DEPDC4Q8N2C3 294 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 ANKRD42Q8N9B4 389 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 OR52N5Q8NH56 324 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 OIT3Q8WWZ8 545 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 FAM168AQ92567 244 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 PROX1Q92786 737 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 APH1AQ96BI3 265 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 APOPT1Q96IL0 206 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 MUS81Q96NY9 551 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 KCNK17Q96T54 332 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 PRPF18Q99633 342 aaKnown RBP10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 BEX2Q9BXY8 128 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 QRSL1Q9H0R6 528 aaKnown RBP10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 ACER3Q9NUN7 267 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 ASB6Q9NWX5 421 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 MALT1Q9UDY8 824 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 KCNE5Q9UJ90 142 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 POU2F3Q9UKI9 436 aa10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 NOSIPQ9Y314 301 aaKnown RBP10.41□□□□□ -0.74
CARMIL3-204ENST00000561354 TMEM233B4DJY2 109 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 GPR171O14626 319 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 DNPH1O43598 174 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 NPHS1O60500 1241 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 PEX11AO75192 247 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 STX11O75558 287 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 UGT2B17O75795 530 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 CSTAP01040 98 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 IGHV3-9P01782 118 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 CHRNGP07510 517 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 CSF3P09919 207 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 BMP4P12644 408 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 PGCP20142 388 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 PRPS1L1P21108 318 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 FKBP2P26885 142 aaKnown RBP10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 APOBEC1P41238 236 aaKnown RBP10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 FABP6P51161 128 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF83P51522 516 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 SLC16A1P53985 500 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 HBA1P69905 142 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 SPOCK1Q08629 439 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 MERTKQ12866 999 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 GPR68Q15743 365 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 ATP6AP1LQ52LC2 224 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 XKR7Q5GH72 579 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 C1QTNF12Q5T7M4 302 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 HHATQ5VTY9 493 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 CYB5R2Q6BCY4 276 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 B3GLCTQ6Y288 498 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 RIMKLAQ8IXN7 391 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 UBE2J2Q8N2K1 259 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF525Q8N782 197 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 CCDC197Q8NCU1 140 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 OR5D16Q8NGK9 328 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 MGARPQ8TDB4 240 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 C10orf105Q8TEF2 133 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 ZHX1-C8orf76Q96EF9 292 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 INPP5KQ9BT40 448 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 BHLHE41Q9C0J9 482 aaPredicted RBP10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 EML4Q9HC35 981 aaKnown RBP10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 TAS2R16Q9NYV7 291 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 SPIN1Q9Y657 262 aaPredicted RBP10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 PLCE1Q9P212 2302 aa10.4□□□□□ -0.74
CARMIL3-204ENST00000561354 NUP214P35658 2090 aaPredicted RBP10.4□□□□□ -0.75
CARMIL3-204ENST00000561354 CCT8L1PA6NM43 557 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 PDLIM1O00151 329 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 ANKRD28O15084 1053 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 CFLARO15519 480 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 FCMRO60667 390 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 MRPL33O75394 65 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 CYP7B1O75881 506 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 PMS2P2O95744 297 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 GUSBP08236 651 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 UBTFL6P0CB48 400 aaPredicted RBP10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 CREB1P16220 341 aa10.39□□□□□ -0.75
CARMIL3-204ENST00000561354 MATN1P21941 496 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms