RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 SLX1AQ9BQ83 275 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 CCM2LQ9NUG4 571 aaPredicted RBP12.95□□□□□ -0.34
SMAD6-204ENST00000559931 SPRR3Q9UBC9 169 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 CHRNA9Q9UGM1 479 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 A4GNTQ9UNA3 340 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 CAMK2AQ9UQM7 478 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 TESMINQ9Y4I5 508 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 AP4S1Q9Y587 144 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 AP4B1Q9Y6B7 739 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 ZNF462Q96JM2 2506 aa12.95□□□□□ -0.34
SMAD6-204ENST00000559931 A0A1B0GVC2 190 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 TMEM72A0PK05 275 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 ETV2O00321 342 aaPredicted RBP12.94□□□□□ -0.34
SMAD6-204ENST00000559931 CHP2O43745 196 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 EFNA2O43921 213 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 FKBP6O75344 327 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 H1F0P07305 194 aaKnown RBP12.94□□□□□ -0.34
SMAD6-204ENST00000559931 EDN3P14138 238 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 ABOP16442 354 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 FKBP2P26885 142 aaKnown RBP12.94□□□□□ -0.34
SMAD6-204ENST00000559931 ELK4P28324 431 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 SLC7A1P30825 629 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 SMIM11AP58511 58 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 SPIBQ01892 262 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 SELENBP1Q13228 472 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 TRAM2Q15035 370 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 WLSQ5T9L3 541 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 VASNQ6EMK4 673 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 C3orf33Q6P1S2 294 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 TTC33Q6PID6 262 aaPredicted RBP12.94□□□□□ -0.34
SMAD6-204ENST00000559931 CHMP1BQ7LBR1 199 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 RRM2BQ7LG56 351 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 PIWIL3Q7Z3Z3 882 aaKnown RBP12.94□□□□□ -0.34
SMAD6-204ENST00000559931 ATG4DQ86TL0 474 aaPredicted RBP12.94□□□□□ -0.34
SMAD6-204ENST00000559931 TSPYL5Q86VY4 417 aaPredicted RBP12.94□□□□□ -0.34
SMAD6-204ENST00000559931 MEIOBQ8N635 442 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 OR52J3Q8NH60 311 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 PHF10Q8WUB8 498 aaKnown RBP12.94□□□□□ -0.34
SMAD6-204ENST00000559931 STMN2Q93045 179 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 SLC38A4Q969I6 547 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 TIMP4Q99727 224 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 BARD1Q99728 777 aaKnown RBP12.94□□□□□ -0.34
SMAD6-204ENST00000559931 NMNAT1Q9HAN9 279 aaPredicted RBP12.94□□□□□ -0.34
SMAD6-204ENST00000559931 C12orf10Q9HB07 376 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 SHANK1Q9Y566 2161 aa12.94□□□□□ -0.34
SMAD6-204ENST00000559931 OR14I1A6ND48 311 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 A8MVM7 634 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 EIF1AYO14602 144 aaKnown RBP12.93□□□□□ -0.34
SMAD6-204ENST00000559931 FFAR1O14842 300 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 SEMA7AO75326 666 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 ENTPD5O75356 428 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 CST1P01037 141 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 THRBP10828 461 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 PTNP21246 168 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 TDGF1P3P51864 188 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 MAP2K6P52564 334 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 DLX5P56178 289 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 CRYZQ08257 329 aaKnown RBP12.93□□□□□ -0.34
SMAD6-204ENST00000559931 SGCBQ16585 318 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 NHSL2Q5HYW2 709 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 FGD3Q5JSP0 725 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 PDSS1Q5T2R2 415 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 SWT1Q5T5J6 900 aaKnown RBP12.93□□□□□ -0.34
SMAD6-204ENST00000559931 TSEN54Q7Z6J9 526 aaKnown RBP12.93□□□□□ -0.34
SMAD6-204ENST00000559931 P3H2Q8IVL5 708 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 OFCC1Q8IZS5 231 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 C10orf53Q8N6V4 93 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 OR5M9Q8NGP3 310 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 SLC25A43Q8WUT9 341 aaPredicted RBP12.93□□□□□ -0.34
SMAD6-204ENST00000559931 PYDC1Q8WXC3 89 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 SLCO4A1Q96BD0 722 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 DNAJA3Q96EY1 480 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 MPP4Q96JB8 637 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 OR5B2Q96R09 309 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 OR11A1Q9GZK7 315 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
SMAD6-204ENST00000559931 A0A087WUJ7 227 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 H0Y3Z8 333 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 H0YHG0 523 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 BCKDKO14874 412 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 ZNF208O43345 1280 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 HNRNPRO43390 633 aaKnown RBP12.92□□□□□ -0.34
SMAD6-204ENST00000559931 TIPRLO75663 272 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 KRT36O76013 467 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 GADD45GO95257 159 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 THY1P04216 161 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 TPOP07202 933 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 RRM2P31350 389 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 LHX2P50458 406 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 CLDN20P56880 219 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 RPS3AP61247 264 aaKnown RBP12.92□□□□□ -0.34
SMAD6-204ENST00000559931 BCL2A1Q16548 175 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 C3AR1Q16581 482 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 GXYLT1Q4G148 440 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 SYT14P1Q58G82 188 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 DCST1Q5T197 706 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 HBMQ6B0K9 141 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 OR2T5Q6IEZ7 315 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 PPP4R4Q6NUP7 873 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 ZNF585AQ6P3V2 769 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms