RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CCDC120Q96HB5 630 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 C7orf34Q96L11 122 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 KLHL15Q96M94 604 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 MCHR1Q99705 422 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 PTDSS2Q9BVG9 487 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 MAN2C1Q9NTJ4 1040 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 ALKBH4Q9NXW9 302 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 TESQ9UGI8 421 aaKnown RBP9.78□□□□□ -0.84
TPM1-217ENST00000559108 SLC7A8Q9UHI5 535 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 A4GNTQ9UNA3 340 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 MEMO1Q9Y316 297 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 TMED7Q9Y3B3 224 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 AP4B1Q9Y6B7 739 aa9.78□□□□□ -0.84
TPM1-217ENST00000559108 INTS1Q8N201 2190 aaKnown RBP9.78□□□□□ -0.84
TPM1-217ENST00000559108 FASNP49327 2511 aaKnown RBP9.78□□□□□ -0.84
TPM1-217ENST00000559108 IGHV3-15A0A0B4J1V0 119 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 FAM47E-STBD1D6RA91 191 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 H0Y3Z8 333 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 ADAMDEC1O15204 470 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 CXCL13O43927 109 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 DNAJC8O75937 253 aaPredicted RBP9.77□□□□□ -0.85
TPM1-217ENST00000559108 DIRAS1O95057 198 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 EIF1P41567 113 aaKnown RBP9.77□□□□□ -0.85
TPM1-217ENST00000559108 POLR2HP52434 150 aaKnown RBP9.77□□□□□ -0.85
TPM1-217ENST00000559108 VLDLRP98155 873 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 FOXF2Q12947 444 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 MYBPHQ13203 477 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 PIN1Q13526 163 aaPredicted RBP9.77□□□□□ -0.85
TPM1-217ENST00000559108 BCL2A1Q16548 175 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 ZSWIM7Q19AV6 140 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 TMEM176BQ3YBM2 270 aaPredicted RBP9.77□□□□□ -0.85
TPM1-217ENST00000559108 SPATS1Q496A3 300 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 C4orf17Q53FE4 359 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 SYT14P1Q58G82 188 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 WLSQ5T9L3 541 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 LINC00114Q6XXX2 140 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 DEF8Q6ZN54 512 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 GDF7Q7Z4P5 450 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 LIX1LQ8IVB5 337 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 TNIP2Q8NFZ5 429 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 FNDC9Q8TBE3 224 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 SLC26A7Q8TE54 656 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 ADAMTS16Q8TE57 1224 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 TMEM234Q8WY98 164 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 UCN2Q96RP3 112 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 TRIB1Q96RU8 372 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 TTYH2Q9BSA4 534 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 TP63Q9H3D4 680 aaPredicted RBP9.77□□□□□ -0.85
TPM1-217ENST00000559108 ACTR3BQ9P1U1 418 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 RHCGQ9UBD6 479 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 SEC14L4Q9UDX3 406 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 CHRNA9Q9UGM1 479 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 MAGEL2Q9UJ55 1249 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 ING1Q9UK53 422 aaPredicted RBP9.77□□□□□ -0.85
TPM1-217ENST00000559108 BAG5Q9UL15 447 aa9.77□□□□□ -0.85
TPM1-217ENST00000559108 LRRN3E7EW58 273 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 hCG_2039718K7EN88 272 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 CCL21O00585 134 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 PRRG2O14669 202 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 PIP5K1CO60331 668 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 FMO6PO60774 539 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 MT-ND1P03886 318 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 ENPP1P22413 925 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 APOBEC1P41238 236 aaKnown RBP9.76□□□□□ -0.85
TPM1-217ENST00000559108 EIF1AXP47813 144 aaKnown RBP9.76□□□□□ -0.85
TPM1-217ENST00000559108 RBPJQ06330 500 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 LTBQ06643 244 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 TRIM25Q14258 630 aaKnown RBP9.76□□□□□ -0.85
TPM1-217ENST00000559108 DNAL1Q4LDG9 190 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 IFI44LQ53G44 452 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 C3orf33Q6P1S2 294 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 NKAIN4Q8IVV8 208 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 ARHGAP24Q8N264 748 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 BHLHE22Q8NFJ8 381 aaPredicted RBP9.76□□□□□ -0.85
TPM1-217ENST00000559108 OR2V1Q8NHB1 315 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 ZPLD1Q8TCW7 415 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 ROBO4Q8WZ75 1007 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 PROX1Q92786 737 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 SLC38A4Q969I6 547 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 ASB9Q96DX5 294 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 KTI12Q96EK9 354 aaPredicted RBP9.76□□□□□ -0.85
TPM1-217ENST00000559108 NSMCE2Q96MF7 247 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 OR5B2Q96R09 309 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 ZNF559Q9BR84 538 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 ZNF426Q9BUY5 554 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 TRIM2Q9C040 744 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 CACYBPQ9HB71 228 aaKnown RBP9.76□□□□□ -0.85
TPM1-217ENST00000559108 HHATLQ9HCP6 504 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 NDUFAF4Q9P032 175 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 POMPQ9Y244 141 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 HCFC1P51610 2035 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 CACNA1CQ13936 2221 aa9.76□□□□□ -0.85
TPM1-217ENST00000559108 FREM1Q5H8C1 2179 aa9.75□□□□□ -0.85
TPM1-217ENST00000559108 A0A087WUJ7 227 aa9.75□□□□□ -0.85
TPM1-217ENST00000559108 A0A0G2JNJ9 132 aa9.75□□□□□ -0.85
TPM1-217ENST00000559108 MBD3L4A6NDZ8 208 aaPredicted RBP9.75□□□□□ -0.85
TPM1-217ENST00000559108 MBD3L3A6NE82 208 aaPredicted RBP9.75□□□□□ -0.85
TPM1-217ENST00000559108 MBD3L5A6NJ08 208 aaPredicted RBP9.75□□□□□ -0.85
TPM1-217ENST00000559108 CD8B2A6NJW9 211 aa9.75□□□□□ -0.85
TPM1-217ENST00000559108 FIGNL2A6NMB9 653 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms