RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 GAS6Q14393 721 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 OR6V1Q8N148 313 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 SYS1Q8N2H4 156 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 LHFPL5Q8TAF8 219 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 ING5Q8WYH8 240 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 TTTY10Q9BZA0 68 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 ZNF350Q9GZX5 532 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 NPDC1Q9NQX5 325 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 MGAT4CQ9UBM8 478 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 KCNK6Q9Y257 313 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 LTBP2Q14767 1821 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 SYNDIG1LA6NDD5 238 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 ZNF879B4DU55 563 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 GABARAPH6UMI1 98 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 LATO43561 262 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 PTP4A3O75365 173 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 SERPINI2O75830 405 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 ALDOBP05062 364 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 NID1P14543 1247 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 ATF4P18848 351 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 RPS4Y1P22090 263 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 SIRPAP78324 504 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 DHODHQ02127 395 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 ZNF234Q14588 700 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 ARHGAP11AQ6P4F7 1023 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 RPL22L1Q6P5R6 122 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 FAM198BQ6UWH4 519 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 C3P1Q6ZMU1 363 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 KANSL1Q7Z3B3 1105 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 KCTD20Q7Z5Y7 419 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 IQCF2Q8IXL9 164 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 SPICQ8N5J4 248 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 EID2Q8N6I1 236 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 OR4K14Q8NGD5 310 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 GAL3ST3Q96A11 431 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 PELI1Q96FA3 418 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 SFXN2Q96NB2 322 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 LRRC3BQ96PB8 259 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 OR14A2Q96R54 314 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 TEX101Q9BY14 249 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 SYNPO2LQ9H987 977 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 KLHL9Q9P2J3 617 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 OR1A2Q9Y585 309 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 L7N2F9 121 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 ARPC1BO15143 372 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 KRT33AO76009 404 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 CD1AP06126 327 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 ACSM4P0C7M7 580 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 OR2T7P0C7T2 308 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 ZP3P21754 424 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 SLC6A6P31641 620 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 TNFRSF17Q02223 184 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 CAMK1Q14012 370 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 NHLRC3Q5JS37 347 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 ETFBKMTQ8IXQ9 262 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 RFLNBQ8N5W9 214 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 OR2T27Q8NH04 317 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 PHYHIPQ92561 330 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 PIGKQ92643 395 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 DEC1Q9P2X7 70 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 SESN1Q9Y6P5 492 aa10.91□□□□□ -0.66
VIPAS39-211ENST00000557658 TRBV2A0A0J9YWF9 115 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 OR52A4PA6NMU1 304 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 HIDE1A8MVS5 230 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 PDCD5O14737 125 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 KHDRBS3O75525 346 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 PCDH8O95206 1070 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 HOXD4P09016 255 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 GIPP09681 153 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 CPN1P15169 458 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 CTRB1P17538 263 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 EDNRAP25101 427 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 HCCSP53701 268 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 RPS11P62280 158 aaKnown RBP eCLIP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 DCST2Q5T1A1 773 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 CTRB2Q6GPI1 263 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 SLC25A25Q6KCM7 469 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 MEIOBQ8N635 442 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 KCT2Q8NC54 265 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 OR52I2Q8NH67 350 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 SNX33Q8WV41 574 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 SUSD6Q92537 303 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 ZMYND19Q96E35 227 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 ELMOD3Q96FG2 381 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 DERL3Q96Q80 235 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 CNN2Q99439 309 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 TIMM29Q9BSF4 260 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 TMEM27Q9HBJ8 222 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 MEPEQ9NQ76 525 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 C14orf105Q9NVL8 296 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 SPHK1Q9NYA1 384 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 MUC22E2RYF6 1773 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 PLSCR5A0PG75 271 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 A8MUA0 341 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 TSPAN4O14817 238 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 MID1O15344 667 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 MAGEB4O15481 346 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 ADRB1P08588 477 aa10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 ZNF888P0CJ79 500 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-211ENST00000557658 IFNGR1P15260 489 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms