RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ATP6V1C1P21283 382 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 PRPH2P23942 346 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 MPGP29372 298 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 CALCRP30988 508 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 KHKP50053 298 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 MERTKQ12866 999 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 CBFBQ13951 182 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 CCNIQ14094 377 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 IMPG1Q17R60 797 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 HIKESHIQ53FT3 197 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 PDZK1Q5T2W1 519 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 ANKRD16Q6P6B7 361 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 ADGRG3Q86Y34 549 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 PIGXQ8TBF5 258 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 UBASH3BQ8TF42 649 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 ZNF418Q8TF45 676 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-221ENST00000557293 NEU4Q8WWR8 484 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-221ENST00000557293 JADE3Q92613 823 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 PPCDCQ96CD2 204 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 METTL2AQ96IZ6 378 aaKnown RBP10.87□□□□□ -0.67
PSEN1-221ENST00000557293 SLC38A2Q96QD8 506 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 SDF2Q99470 211 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 ZNF747Q9BV97 191 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 CCDC106Q9BWC9 280 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 OR11A1Q9GZK7 315 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 SAP130Q9H0E3 1048 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 RACGAP1Q9H0H5 632 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 KCNF1Q9H3M0 494 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 SEC61A2Q9H9S3 476 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 CTPS2Q9NRF8 586 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 SERINC1Q9NRX5 453 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 ZCCHC3Q9NUD5 404 aaKnown RBP10.87□□□□□ -0.67
PSEN1-221ENST00000557293 GPATCH2Q9NW75 528 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 ZNF180Q9UJW8 692 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 STK38LQ9Y2H1 464 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 PCDHGB1Q9Y5G3 927 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 PTGDR2Q9Y5Y4 395 aa10.87□□□□□ -0.67
PSEN1-221ENST00000557293 NUP214P35658 2090 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-221ENST00000557293 CCDC151A5D8V7 595 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 TRIM77I1YAP6 450 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 WNT9BO14905 357 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 BCAS1O75363 584 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-221ENST00000557293 SNUPNO95149 360 aaKnown RBP10.86□□□□□ -0.67
PSEN1-221ENST00000557293 WNT11O96014 354 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 SDC1P18827 310 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 PHBP35232 272 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 CCR4P51679 360 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 NAAAQ02083 359 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 SLC17A1Q14916 467 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 ZNF141Q15928 474 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 AP1ARQ63HQ0 302 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 VHLLQ6RSH7 139 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 UGT2A3Q6UWM9 527 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 CASP12Q6UXS9 341 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 TIFABQ6ZNK6 161 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 OLIG3Q7RTU3 272 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 GLCCI1Q86VQ1 547 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 RELL1Q8IUW5 271 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 SVOPLQ8N434 492 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 ZNF614Q8N883 585 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 OR2T11Q8NH01 316 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 CLDND2Q8NHS1 167 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 CLHC1Q8NHS4 586 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 PSMA8Q8TAA3 256 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 SLC25A43Q8WUT9 341 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-221ENST00000557293 TMEM186Q96B77 213 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 ARL8AQ96BM9 186 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 TSSK3Q96PN8 268 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 KATNB1Q9BVA0 655 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 RBM4Q9BWF3 364 aaKnown RBP10.86□□□□□ -0.67
PSEN1-221ENST00000557293 ACTRT3Q9BYD9 372 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 IQCGQ9H095 443 aaKnown RBP10.86□□□□□ -0.67
PSEN1-221ENST00000557293 HIF1ANQ9NWT6 349 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 CRNNQ9UBG3 495 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-221ENST00000557293 UPB1Q9UBR1 384 aa10.86□□□□□ -0.67
PSEN1-221ENST00000557293 A0A0G2JK05 382 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 POC1B-GALNT4F8VUJ3 575 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 DNPH1O43598 174 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 FCMRO60667 390 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 TFPIP10646 304 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 IMPDH2P12268 514 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 IFNGR1P15260 489 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 PCMT1P22061 227 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 GCAP28676 217 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 THBS4P35443 961 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 APOBEC1P41238 236 aaKnown RBP10.85□□□□□ -0.67
PSEN1-221ENST00000557293 CCT3P49368 545 aaKnown RBP10.85□□□□□ -0.67
PSEN1-221ENST00000557293 TGFBR3Q03167 851 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 RFTN2Q52LD8 501 aaPredicted RBP10.85□□□□□ -0.67
PSEN1-221ENST00000557293 THSD4Q6ZMP0 1018 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 SLC22A9Q8IVM8 553 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 TMCO5AQ8N6Q1 288 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 ZDHHC22Q8N966 263 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 ADAMTS15Q8TE58 950 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 WDR60Q8WVS4 1066 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 BCL2L2Q92843 193 aaPredicted RBP10.85□□□□□ -0.67
PSEN1-221ENST00000557293 CHMP6Q96FZ7 201 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 CCT7Q99832 543 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 NMUR2Q9GZQ4 415 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 ESM1Q9NQ30 184 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms