RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SLC7A13Q8TCU3 470 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 GNPDA2Q8TDQ7 276 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 OIT3Q8WWZ8 545 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 RORBQ92753 470 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 HOXB13Q92826 284 aaPredicted RBP4.1□□□□□ -1.75
SRP54-212ENST00000556992 CDS1Q92903 461 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 SLC35B4Q969S0 331 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 TMIGD2Q96BF3 282 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 SARAFQ96BY9 339 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 NMD3Q96D46 503 aaKnown RBP4.1□□□□□ -1.75
SRP54-212ENST00000556992 SLC41A2Q96JW4 573 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 ZC3H10Q96K80 434 aaKnown RBP4.1□□□□□ -1.75
SRP54-212ENST00000556992 PRRC1Q96M27 445 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 DGAT2Q96PD7 388 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 OR1F2PQ96R84 312 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 CSF3RQ99062 836 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 ZNF559Q9BR84 538 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 FUZQ9BT04 418 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 LMF2Q9BU23 707 aaKnown RBP4.1□□□□□ -1.75
SRP54-212ENST00000556992 CCDC90BQ9GZT6 254 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 ZNF350Q9GZX5 532 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 FANCEQ9HB96 536 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 ADAP2Q9NPF8 381 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 KRCC1Q9NPI7 259 aaPredicted RBP4.1□□□□□ -1.75
SRP54-212ENST00000556992 RASSF1Q9NS23 344 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 CUTCQ9NTM9 273 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 RLIMQ9NVW2 624 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 CLN6Q9NWW5 311 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 IMPAD1Q9NX62 359 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 PTTG2Q9NZH5 202 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 MAT2BQ9NZL9 334 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 VSX1Q9NZR4 365 aaPredicted RBP4.1□□□□□ -1.75
SRP54-212ENST00000556992 TMEM9Q9P0T7 183 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 HCN3Q9P1Z3 774 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 ERVK-18Q9QC07 812 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 PRODH2Q9UF12 536 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 MUTYHQ9UIF7 546 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 GMEB2Q9UKD1 530 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 MRTO4Q9UKD2 239 aaKnown RBP4.1□□□□□ -1.75
SRP54-212ENST00000556992 PILRBQ9UKJ0 227 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 MKLN1Q9UL63 735 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 A4GNTQ9UNA3 340 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 CFL2Q9Y281 166 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 MMACHCQ9Y4U1 282 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 PCDHGA6Q9Y5G7 932 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 MYLKQ15746 1914 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 USP24Q9UPU5 2620 aa4.1□□□□□ -1.75
SRP54-212ENST00000556992 PLXNA2O75051 1894 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 HELZP42694 1942 aaKnown RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 MIA3Q5JRA6 1907 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 TCF20Q9UGU0 1960 aaKnown RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 ASH1LQ9NR48 2969 aaKnown RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 DOCK6Q96HP0 2047 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ZFYVE26Q68DK2 2539 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 A0A1B0GTQ1 180 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 CPED1A4D0V7 1026 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 TRAPPC13A5PLN9 417 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 HTR3EA5X5Y0 456 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 VGLL3A8MV65 326 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ZNF99A8MXY4 864 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 TMEM150CB9EJG8 249 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 H3BN98 237 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 M0R3H8 397 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 SLC1A7O00341 560 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 AHCYL1O43865 530 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PCDHGA12O60330 932 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 BRINP1O60477 761 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 NME6O75414 186 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 WBP4O75554 376 aaKnown RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 OR6B1O95007 311 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 KCNK2O95069 426 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 CPNE6O95741 557 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 HMGN1P05114 100 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 CHRM2P08172 466 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 GIMD1P0DJR0 217 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ACP2P11117 423 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 TDGF1P13385 188 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 POU2F1P14859 743 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 AGXTP21549 392 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 DRD5P21918 477 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PAX7P23759 505 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 CHMP24386 653 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 ELAVL4P26378 380 aaKnown RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 DCKP27707 260 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 POU1F1P28069 291 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 EPHA2P29317 976 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 EPHA8P29322 1005 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 LCN1P31025 176 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PTGER1P34995 402 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 RORAP35398 523 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 PPICP45877 212 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 IDH2P48735 452 aaKnown RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 EMDP50402 254 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 DUSP3P51452 185 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 PDX1P52945 283 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 GFERP55789 205 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 RGS8P57771 180 aaPredicted RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 DCAF7P61962 342 aa4.09□□□□□ -1.75
SRP54-212ENST00000556992 EEF1A1P68104 462 aaKnown RBP4.09□□□□□ -1.75
SRP54-212ENST00000556992 SLC35A2P78381 396 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms