RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 RPL38P63173 70 aaKnown RBP10.41□□□□□ -0.74
ACTN1-221ENST00000556571 MERTKQ12866 999 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 SKP2Q13309 424 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 TP53BP2Q13625 1128 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 SWI5Q1ZZU3 235 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 MST1LQ2TV78 715 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 SPDYE7PQ495Y7 208 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 IQCCQ4KMZ1 466 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 RNF165Q6ZSG1 346 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 HOMEZQ8IX15 550 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 WDR31Q8NA23 367 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 OR2T11Q8NH01 316 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 PSMA8Q8TAA3 256 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 PIGXQ8TBF5 258 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 OR5P2Q8WZ92 322 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 C3orf49Q96BT1 292 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 FOXN4Q96NZ1 517 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 TMEM109Q9BVC6 243 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 NMUR2Q9GZQ4 415 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 SLC17A5Q9NRA2 495 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 ACER3Q9NUN7 267 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 GPATCH2Q9NW75 528 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 OXSMQ9NWU1 459 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 MKS1Q9NXB0 559 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 ATP6V1HQ9UI12 483 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 DCTN4Q9UJW0 460 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 AMDHD2Q9Y303 409 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 TRAF6Q9Y4K3 522 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 SPIN1Q9Y657 262 aaPredicted RBP10.41□□□□□ -0.74
ACTN1-221ENST00000556571 MGAM2Q2M2H8 2515 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 IGHV4-61A0A0C4DH41 118 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 PDLIM1O00151 329 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 AZIN1O14977 448 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 DNPH1O43598 174 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 SPAG7O75391 227 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 CYP7B1O75881 506 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 CHEK2O96017 543 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 ITGA5P08648 1049 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 TFPIP10646 304 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 BCKDHAP12694 445 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 ZNF23P17027 643 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 PGCP20142 388 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 FKBP2P26885 142 aaKnown RBP10.4□□□□□ -0.74
ACTN1-221ENST00000556571 NTF4P34130 210 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 HPCAL1P37235 193 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 APOBEC1P41238 236 aaKnown RBP10.4□□□□□ -0.74
ACTN1-221ENST00000556571 FOXG1P55316 489 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-221ENST00000556571 TGFBR3Q03167 851 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 ZNF141Q15928 474 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 CR1LQ2VPA4 569 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 LSM12Q3MHD2 195 aaKnown RBP10.4□□□□□ -0.74
ACTN1-221ENST00000556571 CEP85LQ5SZL2 805 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 PDZK1Q5T2W1 519 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 LIPMQ5VYY2 423 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 NATD1Q8N6N6 113 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 C1orf162Q8NEQ5 155 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-221ENST00000556571 OR52E4Q8NGH9 312 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 MOAP1Q96BY2 351 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 FBXO17Q96EF6 278 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 SDF2Q99470 211 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 C12orf65Q9H3J6 166 aaKnown RBP10.4□□□□□ -0.74
ACTN1-221ENST00000556571 PARPBPQ9NWS1 579 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 HDGFL3Q9Y3E1 203 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 ARFGEF3Q5TH69 2177 aa10.4□□□□□ -0.74
ACTN1-221ENST00000556571 TMEM114B3SHH9 223 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 ATP6V1G2-DDX39BF2Z307 99 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 ANKRD28O15084 1053 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 LSM1O15116 133 aaKnown RBP10.39□□□□□ -0.75
ACTN1-221ENST00000556571 SCAMP2O15127 329 aaKnown RBP10.39□□□□□ -0.75
ACTN1-221ENST00000556571 TRIM13O60858 407 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 PMS2P2O95744 297 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 WNT11O96014 354 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 CSTAP01040 98 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 LINC00032P0C843 101 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 LAMP1P11279 417 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 MAGEA8P43361 318 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 CLK1P49759 484 aaKnown RBP10.39□□□□□ -0.75
ACTN1-221ENST00000556571 PRPS1P60891 318 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 SNRPD2P62316 118 aaKnown RBP10.39□□□□□ -0.75
ACTN1-221ENST00000556571 CARTPTQ16568 116 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 GALNTL6Q49A17 601 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 BHLHB9Q6PI77 547 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 EIF3MQ7L2H7 374 aaKnown RBP10.39□□□□□ -0.75
ACTN1-221ENST00000556571 MEX3DQ86XN8 651 aaKnown RBP10.39□□□□□ -0.75
ACTN1-221ENST00000556571 C10orf107Q8IVU9 208 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 OR7A2PQ8NGA2 310 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 SFXN5Q8TD22 340 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 SORCS2Q96PQ0 1159 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 OR7D2Q96RA2 312 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 TUBB1Q9H4B7 451 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 ATAD3AQ9NVI7 634 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 UPB1Q9UBR1 384 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 CHRNA9Q9UGM1 479 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 MOKQ9UQ07 419 aa10.39□□□□□ -0.75
ACTN1-221ENST00000556571 DUXAA6NLW8 204 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 WIPF1O43516 503 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 STX11O75558 287 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 C6orf47O95873 294 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 AK1P00568 194 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 UBTFL6P0CB48 400 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms