RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PCDHB10Q9UN67 800 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 B4DSR2 109 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 OR2B6P58173 313 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 HIKESHIQ53FT3 197 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 TRIM46Q7Z4K8 759 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 WDR60Q8WVS4 1066 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 NEU4Q8WWR8 484 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-219ENST00000556432 L3HYPDHQ96EM0 354 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 ZNF764Q96H86 408 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-219ENST00000556432 SLC38A2Q96QD8 506 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 ACTRT3Q9BYD9 372 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 SAP130Q9H0E3 1048 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 PLK3Q9H4B4 646 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 NARFLQ9H6Q4 476 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 DYNLRB1Q9NP97 96 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 PARPBPQ9NWS1 579 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 SLC9A8Q9Y2E8 581 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 GRIP1Q9Y3R0 1128 aa12.12□□□□□ -0.47
ACTN1-219ENST00000556432 IGHV1-18A0A0C4DH31 117 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 SH3PXD2BA1X283 911 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 SERINC4A6NH21 518 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 hCG_2039718K7EN88 272 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 PDLIM1O00151 329 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 ETV2O00321 342 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-219ENST00000556432 KRT33AO76009 404 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 PDE5AO76074 875 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 PMS2P2O95744 297 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 KRT16P08779 473 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 SNRPAP09012 282 aaKnown RBP12.11□□□□□ -0.47
ACTN1-219ENST00000556432 UBTFL6P0CB48 400 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-219ENST00000556432 MPGP29372 298 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 SLC16A1P53985 500 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 SKP2Q13309 424 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 EFNB3Q15768 340 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 EXOSC6Q5RKV6 272 aaKnown RBP12.11□□□□□ -0.47
ACTN1-219ENST00000556432 PRR31Q5SQ13 230 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 TSPO2Q5TGU0 170 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 ZCCHC24Q8N2G6 241 aaKnown RBP12.11□□□□□ -0.47
ACTN1-219ENST00000556432 SVOPLQ8N434 492 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 ZNF563Q8TA94 476 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 ARL5BQ96KC2 179 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 JMJD8Q96S16 334 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 CCT7Q99832 543 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 KATNB1Q9BVA0 655 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 OR11A1Q9GZK7 315 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 LAT2Q9GZY6 243 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 GSTO2Q9H4Y5 243 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 HIF1ANQ9NWT6 349 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 C1orf109Q9NX04 203 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 CHRNA9Q9UGM1 479 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 BAIAP2L1Q9UHR4 511 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 FBXO9Q9UK97 447 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-219ENST00000556432 KCNE3Q9Y6H6 103 aa12.11□□□□□ -0.47
ACTN1-219ENST00000556432 ESPNB1AK53 854 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 CSTAP01040 98 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 SDC1P18827 310 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 CCNA2P20248 432 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 FRKP42685 505 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-219ENST00000556432 HILS1P60008 231 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 UBE2NP61088 152 aaKnown RBP12.1□□□□□ -0.47
ACTN1-219ENST00000556432 IL1RL1Q01638 556 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 SLC7A5Q01650 507 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 GPR68Q15743 365 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 ADRM1Q16186 407 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 AWAT1Q58HT5 328 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 DEF8Q6ZN54 512 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 ZNF786Q8N393 782 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 OR56A1Q8NGH5 318 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 UBASH3BQ8TF42 649 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 DCAKDQ8WVC6 231 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 TMEM186Q96B77 213 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 CTPS2Q9NRF8 586 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 SIRT3Q9NTG7 399 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-219ENST00000556432 ACER3Q9NUN7 267 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 ZNF180Q9UJW8 692 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 USP22Q9UPT9 525 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 HDGFL3Q9Y3E1 203 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 PCDHGB1Q9Y5G3 927 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 PTGDR2Q9Y5Y4 395 aa12.1□□□□□ -0.47
ACTN1-219ENST00000556432 VSTM5A8MXK1 200 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 NPIPB9F8W1W9 429 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 LYNX1G3V0Z9 82 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 ANKRD28O15084 1053 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 TMPRSS2O15393 492 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 DNPH1O43598 174 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 TBX19O60806 448 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 LYNX1P0DP58 116 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 EPHA1P21709 976 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 RYKP34925 604 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 HPCAL1P37235 193 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 APOBEC1P41238 236 aaKnown RBP12.09□□□□□ -0.47
ACTN1-219ENST00000556432 LIMS1P48059 325 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 CCT3P49368 545 aaKnown RBP12.09□□□□□ -0.47
ACTN1-219ENST00000556432 RPL38P63173 70 aaKnown RBP12.09□□□□□ -0.47
ACTN1-219ENST00000556432 PDE7AQ13946 482 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 CFAP157Q5JU67 520 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 C1QTNF12Q5T7M4 302 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 SPATA21Q7Z572 469 aa12.09□□□□□ -0.47
ACTN1-219ENST00000556432 R3HCC1LQ7Z5L2 792 aaKnown RBP12.09□□□□□ -0.47
ACTN1-219ENST00000556432 METTL2AQ96IZ6 378 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms