RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 ZNF295-AS1Q8N0V1 137 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 NAXEQ8NCW5 288 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 PAPD5Q8NDF8 572 aaKnown RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 OR2M3Q8NG83 312 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 GPR32P1Q8NGA4 272 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 OR4K17Q8NGC6 315 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 OR10Q1Q8NGQ4 319 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 MBD3L2Q8NHZ7 208 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 ZPLD1Q8TCW7 415 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 SLC35B4Q969S0 331 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 C14orf79Q96F83 325 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 RTN4RQ9BZR6 473 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 UCK2Q9BZX2 261 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 SDHAF3Q9NRP4 125 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 ARMC1Q9NVT9 282 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 PPP4R1LQ9P1A2 415 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 NKX1-2Q9UD57 310 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 KCNE5Q9UJ90 142 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 DKKL1Q9UK85 242 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 CAMK2AQ9UQM7 478 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 FAM32AQ9Y421 112 aaKnown RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 CENPVL1A0A0U1RR11 272 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 CDHR4A6H8M9 788 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 NDUFB5O43674 189 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 ZIC3O60481 467 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 TPST1O60507 370 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 LGI1O95970 557 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 CSTAP01040 98 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 UQCRBP14927 111 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 ANPEPP15144 967 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF708P17019 499 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 CHMP24386 653 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 SSTR2P30874 369 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 IFNA8P32881 189 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 LHX2P50458 406 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 CLDN18P56856 261 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 B3GALT5-AS1P59052 145 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 NRF1Q16656 503 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 OR5M10Q6IEU7 315 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 POMZP3Q6PJE2 187 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF550Q7Z398 422 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 PIWIL3Q7Z3Z3 882 aaKnown RBP8.69□□□□□ -1.02
ACTN1-215ENST00000555616 ADGRE4PQ86SQ3 457 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 RANBP3LQ86VV4 465 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-215ENST00000555616 CYP4Z1Q86W10 505 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 CARM1Q86X55 608 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 GRAMD2AQ8IUY3 354 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 ZDHHC21Q8IVQ6 265 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 RELL2Q8NC24 303 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-215ENST00000555616 PHOSPHO1Q8TCT1 267 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 SLCO4A1Q96BD0 722 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 C1GALT1C1Q96EU7 318 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 SFXN2Q96NB2 322 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 UCN2Q96RP3 112 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF347Q96SE7 839 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 ARHGDIGQ99819 225 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 CHID1Q9BWS9 393 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 CALHM2Q9HA72 323 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 IL1RAPQ9NPH3 570 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 POLQO75417 2590 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 PHF3Q92576 2039 aaKnown RBP8.69□□□□□ -1.02
ACTN1-215ENST00000555616 PDZD2O15018 2839 aa8.69□□□□□ -1.02
ACTN1-215ENST00000555616 CSMD1Q96PZ7 3565 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 CLDN24A6NM45 220 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 TMEM229AB2RXF0 380 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 hCG_2039718K7EN88 272 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 M0R3H8 397 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 AP3D1O14617 1153 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 DVL2O14641 736 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF264O43296 627 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 HCRTR2O43614 444 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 EIF4E2O60573 245 aaKnown RBP8.68□□□□□ -1.02
ACTN1-215ENST00000555616 DEAF1O75398 565 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-215ENST00000555616 CYP7B1O75881 506 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 ANGPTL1O95841 491 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 SEMG1P04279 462 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 UBTFL6P0CB48 400 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-215ENST00000555616 TNFRSF1BP20333 461 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 FASP25445 335 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 MAGEA2P43356 314 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 OR1E2P47887 323 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF136P52737 540 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 C17orf67Q0P5P2 114 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 BCL2A1Q16548 175 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 FBXL19-AS1Q494R0 122 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 APOOLQ6UXV4 268 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 MARCH3Q86UD3 253 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 DMRTC2Q8IXT2 367 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-215ENST00000555616 CLIP4Q8N3C7 705 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 TMCO5AQ8N6Q1 288 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 GATSQ8NAP1 163 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 VANGL1Q8TAA9 524 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-215ENST00000555616 TRIB1Q96RU8 372 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 TUBA1CQ9BQE3 449 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 DSN1Q9H410 356 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 EXOSC3Q9NQT5 275 aaKnown RBP8.68□□□□□ -1.02
ACTN1-215ENST00000555616 RLIMQ9NVW2 624 aa8.68□□□□□ -1.02
ACTN1-215ENST00000555616 DNAJB12Q9NXW2 375 aaKnown RBP8.68□□□□□ -1.02
ACTN1-215ENST00000555616 C6orf203Q9P0P8 240 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-215ENST00000555616 CLCF1Q9UBD9 225 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms