RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ZNF407Q9C0G0 2248 aa14.83□□□□□ -0.04
SPTLC2-203ENST00000554901 A0A1W2PRQ8 180 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 H3BML4 177 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 FFAR1O14842 300 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 EFNA2O43921 213 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 WISP2O76076 250 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 LYPD3O95274 346 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 ZNF708P17019 499 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 PTGS2P35354 604 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 RBM34P42696 430 aaKnown RBP14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 LHX2P50458 406 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 DGCR6Q14129 220 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 KPNB1Q14974 876 aaKnown RBP14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 SYT14P1Q58G82 188 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 WLSQ5T9L3 541 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 ZFP1Q6P2D0 407 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 GFRALQ6UXV0 394 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 ESPNLQ6ZVH7 1005 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 GDF7Q7Z4P5 450 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 ZNF605Q86T29 641 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 CHERPQ8IWX8 916 aaKnown RBP14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 PIK3C3Q8NEB9 887 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 DHRS1Q96LJ7 313 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 HS6ST2Q96MM7 605 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 TMEM43Q9BTV4 400 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 ZNF426Q9BUY5 554 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 PRDM14Q9GZV8 571 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 ARMC1Q9NVT9 282 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 PAQR5Q9NXK6 330 aaPredicted RBP14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 SLC7A7Q9UM01 511 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 FREM3P0C091 2139 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 DNAJC13O75165 2243 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 HTR3EA5X5Y0 456 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 A8MVM7 634 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 ADAMDEC1O15204 470 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 KRT36O76013 467 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 THY1P04216 161 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 CLDN18P56856 261 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 GK3PQ14409 553 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 TRAM2Q15035 370 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 SF3B4Q15427 424 aaKnown RBP eCLIP14.82□□□□□ -0.045e-7■■■■□ 24.3
SPTLC2-203ENST00000554901 PDSS1Q5T2R2 415 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 POMZP3Q6PJE2 187 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 ZNF771Q7L3S4 317 aaPredicted RBP14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 MEIOBQ8N635 442 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 KLHL15Q96M94 604 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 POTEKPQ9BYX7 375 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 NMNAT1Q9HAN9 279 aaPredicted RBP14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 HDGFL3Q9Y3E1 203 aa14.82□□□□□ -0.04
SPTLC2-203ENST00000554901 TMEM72A0PK05 275 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 J3KTA2 159 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 NPIPB7O75200 414 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 FKBP6O75344 327 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 C1QL1O75973 258 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 WISP1O95388 367 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 IGF2P01344 180 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 H1F0P07305 194 aaKnown RBP14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 YAP1P46937 504 aaKnown RBP14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 HSF1Q00613 529 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 GGNQ86UU5 652 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 RNF217Q8TC41 542 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 SLCO4A1Q96BD0 722 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 WDYHV1Q96HA8 205 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 EPYCQ99645 322 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 PRSS27Q9BQR3 290 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 ZNF835Q9Y2P0 537 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 AP4S1Q9Y587 144 aa14.81□□□□□ -0.04
SPTLC2-203ENST00000554901 SVILO95425 2214 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 NPIPA2E9PIF3 369 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 NPIPA3F8WFD2 350 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 HNRNPRO43390 633 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 HOXD4P09016 255 aaPredicted RBP14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 FCGR1AP12314 374 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 GABRA1P14867 456 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 ABOP16442 354 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 IL11P20809 199 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 PTGER4P35408 488 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 STARP49675 285 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 HMGA2P52926 109 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 RPS3AP61247 264 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 TMEM176BQ3YBM2 270 aaPredicted RBP14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 DCST1Q5T197 706 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 OR2T5Q6IEZ7 315 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 TTC33Q6PID6 262 aaPredicted RBP14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 Q6ZPB1 254 aaPredicted RBP14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 FGD2Q7Z6J4 655 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 RNF113BQ8IZP6 322 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 OR2T29Q8NH02 315 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 OR6S1Q8NH40 331 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 FAM57AQ8TBR7 257 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 ZPLD1Q8TCW7 415 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 MIB2Q96AX9 1013 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 MAN2C1Q9NTJ4 1040 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 TRAPPC4Q9Y296 219 aa14.8□□□□□ -0.04
SPTLC2-203ENST00000554901 RP1L1Q8IWN7 2480 aaPredicted RBP14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 FIGNL2A6NMB9 653 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 AHRRA9YTQ3 701 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 PRRG2O14669 202 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 DNPH1O43598 174 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms