RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 TSPO2Q5TGU0 170 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 ATF7IP2Q5U623 682 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 RAET1GQ6H3X3 334 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 COX15Q7KZN9 410 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 MISPQ8IVT2 679 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 GCNT2Q8N0V5 402 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 ARL10Q8N8L6 244 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 Q8N9W7 124 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 ZNF740Q8NDX6 193 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 OR51S1Q8NGJ8 323 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 OR52B4Q8NGK2 314 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 NANPQ8TBE9 248 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 BRSK1Q8TDC3 778 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 MRPS31Q92665 395 aaKnown RBP1.93□□□□□ -2.1
VRK1-202ENST00000553683 RDH5Q92781 318 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 MRPL38Q96DV4 380 aaKnown RBP1.93□□□□□ -2.1
VRK1-202ENST00000553683 FOPNLQ96NB1 174 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 TCHPQ9BT92 498 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 VCXQ9H320 206 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 EML4Q9HC35 981 aaKnown RBP1.93□□□□□ -2.1
VRK1-202ENST00000553683 YAE1D1Q9NRH1 226 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 AIG1Q9NVV5 245 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 WARS2Q9UGM6 360 aaKnown RBP1.93□□□□□ -2.1
VRK1-202ENST00000553683 PSG11Q9UQ72 335 aa1.93□□□□□ -2.1
VRK1-202ENST00000553683 PRG3Q9Y2Y8 225 aaPredicted RBP1.93□□□□□ -2.1
VRK1-202ENST00000553683 NOSIPQ9Y314 301 aaKnown RBP1.93□□□□□ -2.1
VRK1-202ENST00000553683 BRD4O60885 1362 aaPredicted RBP1.93□□□□□ -2.1
VRK1-202ENST00000553683 KDM6BO15054 1643 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 LTBP4Q8N2S1 1624 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 IGHV3-64DA0A0J9YX35 117 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 TRIM64A6NGJ6 449 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 TRIM64BA6NI03 449 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 KIF2AO00139 706 aaPredicted RBP1.92□□□□□ -2.1
VRK1-202ENST00000553683 NEMFO60524 1076 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 KLHL41O60662 606 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 SEC22BO75396 215 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 VPS26AO75436 327 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 B3GALNT1O75752 331 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 B3GAT3O94766 335 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 KIAA0754O94854 1291 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 TGFAP01135 160 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 MT-ND3P03897 115 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 PCCAP05165 728 aaPredicted RBP1.92□□□□□ -2.1
VRK1-202ENST00000553683 HSPA5P11021 654 aaKnown RBP1.92□□□□□ -2.1
VRK1-202ENST00000553683 ZNF24P17028 368 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 PGCP20142 388 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 TPSB2P20231 275 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 TBXA2RP21731 343 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 HNRNPA2B1P22626 353 aaKnown RBP1.92□□□□□ -2.1
VRK1-202ENST00000553683 PTGFRP43088 359 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 MNAT1P51948 309 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 PAX5Q02548 391 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 TRDNQ13061 729 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 MRPL28Q13084 256 aaKnown RBP1.92□□□□□ -2.1
VRK1-202ENST00000553683 RIPK1Q13546 671 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 TPSAB1Q15661 275 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 CHI3L2Q15782 390 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 SLC5A12Q1EHB4 618 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 FAM184AQ8NB25 1140 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 OR10A7Q8NGE5 316 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 OR51G1Q8NGK1 321 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 CNIH3Q8TBE1 160 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 FAM151AQ8WW52 585 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 SELENOMQ8WWX9 145 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 PIGCQ92535 297 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 MS4A14Q96JA4 679 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 OR2M2Q96R28 347 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 CCNL2Q96S94 520 aaPredicted RBP1.92□□□□□ -2.1
VRK1-202ENST00000553683 GPA33Q99795 319 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 MRPL13Q9BYD1 178 aaKnown RBP1.92□□□□□ -2.1
VRK1-202ENST00000553683 HSD3B7Q9H2F3 369 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 ACTR8Q9H981 624 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 RRAGDQ9NQL2 400 aaPredicted RBP1.92□□□□□ -2.1
VRK1-202ENST00000553683 NECAP2Q9NVZ3 263 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 SOHLH2Q9NX45 425 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 LAMP5Q9UJQ1 280 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 B9D1Q9UPM9 204 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 ERVW-1Q9UQF0 538 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 TP53TG5Q9Y2B4 290 aa1.92□□□□□ -2.1
VRK1-202ENST00000553683 FRMPD4Q14CM0 1322 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 TTC21BQ7Z4L5 1316 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 ATP10DQ9P241 1426 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 IGHV3OR16-13A0A075B7E8 117 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 STX7O15400 261 aaKnown RBP1.91□□□□□ -2.1
VRK1-202ENST00000553683 MSH4O15457 936 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 FAM189A1O60320 539 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 DFNA5O60443 496 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 KLF8O95600 359 aaPredicted RBP1.91□□□□□ -2.1
VRK1-202ENST00000553683 FGFR1OPO95684 399 aaKnown RBP1.91□□□□□ -2.1
VRK1-202ENST00000553683 GNA14O95837 355 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 PAHP00439 452 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 CA3P07451 260 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 H2BFMP0C1H6 154 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 ZNF44P15621 663 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 FUT1P19526 365 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 MAGP20916 626 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 HTR2AP28223 471 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 ADRA1AP35348 466 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 PRPHP41219 470 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 PDZK1IP1Q13113 114 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms