RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SLC10A1Q14973 349 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 POMZP3Q6PJE2 187 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 B3GNT6Q6ZMB0 384 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 PLEKHM3Q6ZWE6 761 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 YTHDF3Q7Z739 585 aaKnown RBP10.28□□□□□ -0.76
TMEM116-218ENST00000552839 YRDCQ86U90 279 aaKnown RBP10.28□□□□□ -0.76
TMEM116-218ENST00000552839 CARM1Q86X55 608 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 WDSUB1Q8N9V3 476 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 WFDC11Q8NEX6 87 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 OR2M3Q8NG83 312 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 OR52E4Q8NGH9 312 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 CNOT9Q92600 299 aaKnown RBP10.28□□□□□ -0.76
TMEM116-218ENST00000552839 ZBTB8AQ96BR9 441 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 MBD6Q96DN6 1003 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 C1GALT1C1Q96EU7 318 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 PIGQQ9BRB3 760 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 TMEM27Q9HBJ8 222 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 RLIMQ9NVW2 624 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 QPCTLQ9NXS2 382 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 CRIM1Q9NZV1 1036 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 ACTR3BQ9P1U1 418 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 TESQ9UGI8 421 aaKnown RBP10.28□□□□□ -0.76
TMEM116-218ENST00000552839 CD300AQ9UGN4 299 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 KCNE5Q9UJ90 142 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 FBXL2Q9UKC9 423 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 FAM32AQ9Y421 112 aaKnown RBP10.28□□□□□ -0.76
TMEM116-218ENST00000552839 LIPGQ9Y5X9 500 aa10.28□□□□□ -0.76
TMEM116-218ENST00000552839 SPIN1Q9Y657 262 aaPredicted RBP10.28□□□□□ -0.76
TMEM116-218ENST00000552839 RTTNQ86VV8 2226 aa10.27□□□□□ -0.76
TMEM116-218ENST00000552839 VPS13CQ709C8 3753 aa10.27□□□□□ -0.76
TMEM116-218ENST00000552839 NCKAP5O14513 1909 aa10.27□□□□□ -0.76
TMEM116-218ENST00000552839 FIGNL2A6NMB9 653 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 C17orf51A8MQB3 221 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 BCKDKO14874 412 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 C8BP07358 591 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 PSMA4P25789 261 aaKnown RBP10.27□□□□□ -0.77
TMEM116-218ENST00000552839 EIF1P41567 113 aaKnown RBP10.27□□□□□ -0.77
TMEM116-218ENST00000552839 KIR2DL3P43628 341 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 KCNJ5P48544 419 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 IDH2P48735 452 aaKnown RBP10.27□□□□□ -0.77
TMEM116-218ENST00000552839 EPS8Q12929 822 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 TRAP1Q12931 704 aaKnown RBP10.27□□□□□ -0.77
TMEM116-218ENST00000552839 QPRTQ15274 297 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 AAGABQ6PD74 315 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 CBLN3Q6UW01 205 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 CBLL1Q75N03 491 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 CLIP4Q8N3C7 705 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 FADS6Q8N9I5 356 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 FAM83FQ8NEG4 500 aaPredicted RBP10.27□□□□□ -0.77
TMEM116-218ENST00000552839 RNF138Q8WVD3 245 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 ST8SIA1Q92185 356 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 SMPDL3BQ92485 455 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 SLC35B4Q969S0 331 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 SLC47A1Q96FL8 570 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 MDFIQ99750 246 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 UGT2B28Q9BY64 529 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 TRIM2Q9C040 744 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 GORASP2Q9H8Y8 452 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 PROK2Q9HC23 129 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 SERINC1Q9NRX5 453 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 MED17Q9NVC6 651 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 EDARQ9UNE0 448 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 AURKCQ9UQB9 309 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 FREM3P0C091 2139 aa10.27□□□□□ -0.77
TMEM116-218ENST00000552839 IGLV3-32A0A0A0MS00 114 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 TRGV5A0A0B4J1U4 118 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 OR14I1A6ND48 311 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 A6NNC1 897 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 H3BML4 177 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 OIP5O43482 229 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 TPST1O60507 370 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 IGHG3P01860 377 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 INHBBP09529 407 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 ZNF17P17021 662 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 ITGA2P17301 1181 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 ATP6V1B2P21281 511 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 HOXC12P31275 282 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 HTR3AP46098 478 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 TAS2R41P59536 307 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 SELENOWP63302 87 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 CHRNB3Q05901 458 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 FOXO1Q12778 655 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 MERTKQ12866 999 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 FOXF1Q12946 379 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 DEFB113Q30KQ7 82 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 SLC25A35Q3KQZ1 300 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 FAM98BQ52LJ0 330 aaKnown RBP10.26□□□□□ -0.77
TMEM116-218ENST00000552839 WIPI1Q5MNZ9 446 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-218ENST00000552839 FNDC7Q5VTL7 733 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 WBP2NLQ6ICG8 309 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 LCN8Q6JVE9 175 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 PPP4R4Q6NUP7 873 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 PAMR1Q6UXH9 720 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 CHMP1BQ7LBR1 199 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 PRIMA1Q86XR5 153 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 GRAMD2AQ8IUY3 354 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 ARSGQ96EG1 525 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 C18orf12Q96KH6 178 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 SEPHS2Q99611 448 aa10.26□□□□□ -0.77
TMEM116-218ENST00000552839 MCHR1Q99705 422 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms