RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SLC15A2Q16348 729 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 CTF1Q16619 201 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 HLA-BQ31612 363 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 SLC22A6Q4U2R8 563 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 FAM74A3Q4VXF1 159 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 PAN3Q58A45 887 aaKnown RBP3.7□□□□□ -1.82
USP44-208ENST00000552440 SAMD4BQ5PRF9 694 aaKnown RBP3.7□□□□□ -1.82
USP44-208ENST00000552440 REEP3Q6NUK4 255 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 DHRS11Q6UWP2 260 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 PRSS57Q6UWY2 283 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 RTL4Q6ZR62 310 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 GPALPP1Q8IXQ4 340 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 DMBX1Q8NFW5 382 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 OR4F6Q8NGB9 312 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 OR5D18Q8NGL1 313 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 OR4C15Q8NGM1 316 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 LGALS14Q8TCE9 139 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 C18orf25Q96B23 403 aaPredicted RBP3.7□□□□□ -1.82
USP44-208ENST00000552440 RNF170Q96K19 258 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 XPO6Q96QU8 1125 aaKnown RBP3.7□□□□□ -1.82
USP44-208ENST00000552440 ERGIC2Q96RQ1 377 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 RANBP9Q96S59 729 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 SH3GL3Q99963 347 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 RPP25Q9BUL9 199 aaKnown RBP3.7□□□□□ -1.82
USP44-208ENST00000552440 CCDC28BQ9BUN5 200 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 SLITRK2Q9H156 845 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 CXXC4Q9H2H0 198 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 KLK15Q9H2R5 256 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 ATP13A3Q9H7F0 1226 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 SP140LQ9H930 580 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 GDF3Q9NR23 364 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 ZNF282Q9UDV7 671 aaPredicted RBP3.7□□□□□ -1.82
USP44-208ENST00000552440 NUP50Q9UKX7 468 aa3.7□□□□□ -1.82
USP44-208ENST00000552440 FAF1Q9UNN5 650 aaPredicted RBP3.7□□□□□ -1.82
USP44-208ENST00000552440 AK9Q5TCS8 1911 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 JCADQ9P266 1359 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 MAGI3Q5TCQ9 1506 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 PBRM1Q86U86 1689 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 ABCA5Q8WWZ7 1642 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 MAP3K4Q9Y6R4 1608 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 TRBV9A0A0B4J1U6 114 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 CCDC182A6NF36 153 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 C15orf62A8K5M9 175 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 J3KR12 359 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 CASKO14936 926 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 B4GAT1O43505 415 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 EFNA2O43921 213 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 SLC19A2O60779 497 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 RFPL2O75678 378 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 ZMPSTE24O75844 475 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 SC5DO75845 299 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 C1QL1O75973 258 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 DEXIO95424 95 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 TSPAN13O95857 204 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 HLA-HP01893 362 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 ALDOBP05062 364 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 GSTA1P08263 222 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 NHLRC4P0CG21 123 aaPredicted RBP3.69□□□□□ -1.82
USP44-208ENST00000552440 HOXB2P14652 356 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 ZNF7P17097 686 aaPredicted RBP3.69□□□□□ -1.82
USP44-208ENST00000552440 HLA-DMAP28067 261 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 HTR2CP28335 458 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 GTF2H1P32780 548 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 CSKP41240 450 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 CTTNQ14247 550 aaKnown RBP3.69□□□□□ -1.82
USP44-208ENST00000552440 TSC22D1Q15714 1073 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 ZNF77Q15935 545 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 ZNF74Q16587 644 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 C5orf64Q2M2E5 130 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 KLHL38Q2WGJ6 581 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 C2CD6Q53TS8 623 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 EARS2Q5JPH6 523 aaKnown RBP3.69□□□□□ -1.82
USP44-208ENST00000552440 PRMT9Q6P2P2 845 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 LEG1Q6P5S2 330 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 ZNF621Q6ZSS3 439 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 LANCL3Q6ZV70 420 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 FUNDC1Q8IVP5 155 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 ZNF100Q8IYN0 542 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 GBGT1Q8N5D6 347 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 FAM89BQ8N5H3 189 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 JAGN1Q8N5M9 183 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 TRAM1L1Q8N609 369 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 CCDC112Q8NEF3 446 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 OR2AP1Q8NGE2 309 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 OR10A7Q8NGE5 316 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 CPNE4Q96A23 557 aaPredicted RBP3.69□□□□□ -1.82
USP44-208ENST00000552440 BIRC7Q96CA5 298 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 PCED1BQ96HM7 432 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 CELF6Q96J87 481 aaKnown RBP3.69□□□□□ -1.82
USP44-208ENST00000552440 TAAR1Q96RJ0 339 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 TNFRSF13CQ96RJ3 184 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 SLC6A7Q99884 636 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 MAPKAP1Q9BPZ7 522 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 DCTN5Q9BTE1 182 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 NXF5Q9H1B4 397 aaKnown RBP3.69□□□□□ -1.82
USP44-208ENST00000552440 NEUROG2Q9H2A3 272 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 CPVLQ9H3G5 476 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 KIR3DX1Q9H7L2 352 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 POPDC2Q9HBU9 364 aa3.69□□□□□ -1.82
USP44-208ENST00000552440 SLC38A7Q9NVC3 462 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms