RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 FILIP1LQ4L180 1135 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 AGKQ53H12 422 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 MS4A13Q5J8X5 152 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 BSPRYQ5W0U4 402 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 ARHGAP17Q68EM7 881 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 WBP2NLQ6ICG8 309 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 SPOPLQ6IQ16 392 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 KIAA1161Q6NSJ0 714 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 LRRC8BQ6P9F7 803 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 BLOC1S2Q6QNY1 142 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 FAM159AQ6UWV7 190 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 TMEM207Q6UWW9 146 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 C3P1Q6ZMU1 363 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 CYP4V2Q6ZWL3 525 aaPredicted RBP3.3□□□□□ -1.88
LIMA1-208ENST00000551691 ASRGL1Q7L266 308 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 ZNF720Q7Z2F6 126 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 LRRC70Q7Z2Q7 622 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 ERASQ7Z444 233 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 YRDCQ86U90 279 aaKnown RBP3.3□□□□□ -1.88
LIMA1-208ENST00000551691 SATL1Q86VE3 508 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 GPBP1Q86WP2 473 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 C17orf82Q86X59 251 aaPredicted RBP3.3□□□□□ -1.88
LIMA1-208ENST00000551691 PELI3Q8N2H9 469 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 NECAB1Q8N987 351 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 DNAAF3Q8N9W5 541 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 ACBD4Q8NC06 268 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 DMBX1Q8NFW5 382 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 OR6K2Q8NGY2 324 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 TMEM158Q8WZ71 300 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 NCLNQ969V3 563 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 AZIN2Q96A70 460 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 GPR137Q96N19 417 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 PCDHB18PQ96TA0 734 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 S1PR3Q99500 378 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 LPAR4Q99677 370 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 AGPAT1Q99943 283 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 PIGQQ9BRB3 760 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 ZPBPQ9BS86 351 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 FEM1AQ9BSK4 669 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 WRAP53Q9BUR4 548 aaKnown RBP3.3□□□□□ -1.88
LIMA1-208ENST00000551691 TIPINQ9BVW5 301 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 DUSP16Q9BY84 665 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 ULBP1Q9BZM6 244 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 UCK2Q9BZX2 261 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 RAB33BQ9H082 229 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 SLC26A1Q9H2B4 701 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 ZNF665Q9H7R5 613 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 LRRC40Q9H9A6 602 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 PARVGQ9HBI0 331 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 FGF22Q9HCT0 170 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 HACD3Q9P035 362 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 GRID1Q9ULK0 1009 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 PLCL2Q9UPR0 1127 aa3.3□□□□□ -1.88
LIMA1-208ENST00000551691 TENM1Q9UKZ4 2725 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 TRBV4-1A0A0J9YWV2 114 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 NKX2-6A6NCS4 301 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 C5orf60A6NFR6 353 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 SLC1A7O00341 560 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 PHF1O43189 567 aaPredicted RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 GLRA3O75311 464 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 CRLF1O75462 422 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 DFFBO76075 338 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 NTN1O95631 604 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 EML2O95834 649 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 HOXB6P17509 224 aaKnown RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 TNNI1P19237 187 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 DUTP33316 252 aaKnown RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 CA7P43166 264 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 TDGF1P3P51864 188 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 GFERP55789 205 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 DCDC1P59894 354 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 CDKL1Q00532 357 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 HSPA14Q0VDF9 509 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 NFATC2Q13469 925 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 TWIST1Q15672 202 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 PDLIM3Q53GG5 364 aaPredicted RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 LIPKQ5VXJ0 399 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 RUSC1-AS1Q66K80 236 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 ZNF324BQ6AW86 544 aaPredicted RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 OR4C11Q6IEV9 310 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 PWWP2BQ6NUJ5 590 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 IGFL3Q6UXB1 125 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 CERS6Q6ZMG9 384 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 TUBA1AQ71U36 451 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 P4HA3Q7Z4N8 544 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 CPEB2Q7Z5Q1 589 aaKnown RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 PIGZQ86VD9 579 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 ZADH2Q8N4Q0 377 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 FAM89BQ8N5H3 189 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 MAPKAPK5-AS1Q8N8E1 139 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 FADS6Q8N9I5 356 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 ICA1LQ8NDH6 482 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 ZNF397Q8NF99 534 aaPredicted RBP3.29□□□□□ -1.88
LIMA1-208ENST00000551691 OR13A1Q8NGR1 328 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 OR4L1Q8NH43 312 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 RNF139Q8WU17 664 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 TMEM45BQ96B21 275 aa3.29□□□□□ -1.88
LIMA1-208ENST00000551691 TUBGCP3Q96CW5 907 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms