RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 GFRALQ6UXV0 394 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 GID4Q8IVV7 300 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF709Q8N972 641 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 LRRN3Q9H3W5 708 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 CCDC86Q9H6F5 360 aaKnown RBP8.02□□□□□ -1.13
CLIP1-218ENST00000545889 CALHM2Q9HA72 323 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 FGF22Q9HCT0 170 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 UBQLN4Q9NRR5 601 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 FARSAQ9Y285 508 aaKnown RBP8.02□□□□□ -1.13
CLIP1-218ENST00000545889 SLC35A3Q9Y2D2 325 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 C17orf113A0A1B0GUU1 675 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 hCG_1809904A0A1W2PP81 198 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 A0A1W2PPE2 198 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 A0A1W2PR64 198 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 A0A1W2PRV1 198 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 ALOX12BO75342 701 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 HTR3AP46098 478 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 PCBD1P61457 104 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 PSPHP78330 225 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 AQP6Q13520 282 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 RSU1Q15404 277 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 C4orf46Q504U0 113 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 ARHGAP11AQ6P4F7 1023 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 EPGNQ6UW88 154 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF600Q6ZNG1 722 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 OR52N2Q8NGI0 321 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF480Q8WV37 535 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 RSC1A1Q92681 617 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 PDXPQ96GD0 296 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 KCTD7Q96MP8 289 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 PITHD1Q9GZP4 211 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 MMP27Q9H306 513 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 PPP1R14DQ9NXH3 145 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 ABCD2Q9UBJ2 740 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 PCDHGB6Q9Y5F9 930 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 ACOX3O15254 700 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 SNNO75324 88 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 SCGB1D2O95969 90 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 RAC2P15153 192 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 COL9A1P20849 921 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 CRABP1P29762 137 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 MAGEA2P43356 314 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 DAP3P51398 398 aaKnown RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 DNAJB13P59910 316 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 CLCA4Q14CN2 919 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 EXOSC7Q15024 291 aaKnown RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 TRIP6Q15654 476 aaKnown RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 PRAMEF17Q5VTA0 474 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 HACD2Q6Y1H2 254 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 GDPD3Q7L5L3 318 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 DTWD2Q8NBA8 298 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 OR4K13Q8NH42 304 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 C22orf15Q8WYQ4 148 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 TMEM19Q96HH6 336 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 RXFP3Q9NSD7 469 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 ABRACLQ9P1F3 81 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 NOSIPQ9Y314 301 aaKnown RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 A6NIZ1 184 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 DLL1O00548 723 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 TOR1AO14656 332 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 MT-CO3P00414 261 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 GLAP06280 429 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 PYCR1P32322 319 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF81P51508 661 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 CCR5P51681 352 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 FXYD6P3P58550 94 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 RAP1BP61224 184 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 RAP1AP62834 184 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 SH3BP2P78314 561 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 EIF3IQ13347 325 aaKnown RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 HSD17B12Q53GQ0 312 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 SLC18B1Q6NT16 456 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 RNF175Q8N4F7 328 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 MZB1Q8WU39 189 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 CCDC107Q8WV48 283 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 FCGR1BQ92637 280 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 CIDECQ96AQ7 238 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 NECAB3Q96P71 396 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 TMED9Q9BVK6 235 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 PAPOLGQ9BWT3 736 aaKnown RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 SLC22A4Q9H015 551 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 SEMA6CQ9H3T2 930 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 CDCP1Q9H5V8 836 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 DECR2Q9NUI1 292 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 TEX10Q9NXF1 929 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 LUZP4Q9P127 313 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 KCNIP3Q9Y2W7 256 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 KLF13Q9Y2Y9 288 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 NOP16Q9Y3C1 178 aaKnown RBP8.01□□□□□ -1.13
CLIP1-218ENST00000545889 HRH3Q9Y5N1 445 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 A0A096LPI6 279 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 IFNA7P01567 189 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 INHBBP09529 407 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF250P15622 560 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 AOAHP28039 575 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 KDELR2P33947 212 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 AHRP35869 848 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 GABRA2P47869 451 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF45Q02386 682 aa8.01□□□□□ -1.13
CLIP1-218ENST00000545889 CBLBQ13191 982 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms