RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 TEX13CA0A0J9YWL9 993 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 A0A1W2PQ72 361 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 CARNS1A5YM72 827 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 CENPBD1B2RD01 187 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 H7C1C5 153 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 OR10H2O60403 315 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 C1QBP02746 253 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 AHCYP23526 432 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 ATP12AP54707 1039 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 LCN6P62502 163 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 AMZ1Q400G9 498 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 ZNF776Q68DI1 518 aaPredicted RBP13.87□□□□□ -0.19
USP28-214ENST00000545540 KANSL1Q7Z3B3 1105 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 LNX2Q8N448 690 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 KIAA1143Q96AT1 154 aaPredicted RBP13.87□□□□□ -0.19
USP28-214ENST00000545540 WDR89Q96FK6 387 aaPredicted RBP13.87□□□□□ -0.19
USP28-214ENST00000545540 GAL3ST1Q99999 423 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 CACNG6Q9BXT2 260 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 PIGUQ9H490 435 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 KIR3DX1Q9H7L2 352 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 FAM60AQ9NP50 221 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 ISYNA1Q9NPH2 558 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 CIB4A0PJX0 185 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 WNT1P04628 370 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 RAB3BP20337 219 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 SOX2P48431 317 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 CCR4P51679 360 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 CAMK2BQ13554 666 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 POU4F3Q15319 338 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 TMEM255AQ5JRV8 349 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 RNF44Q7L0R7 432 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 TCTE3Q8IZS6 198 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 SIX5Q8N196 739 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 ZNF511Q8NB15 262 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 ZNF431Q8TF32 576 aaPredicted RBP13.86□□□□□ -0.19
USP28-214ENST00000545540 SNX33Q8WV41 574 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 ZNF764Q96H86 408 aaPredicted RBP13.86□□□□□ -0.19
USP28-214ENST00000545540 PGLYRP3Q96LB9 341 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 RAB11FIP5Q9BXF6 653 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 ZNF350Q9GZX5 532 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 CMC2Q9NRP2 79 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 POT1Q9NUX5 634 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 HRASLS2Q9NWW9 162 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 OR6C2Q9NZP2 312 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 COPS3Q9UNS2 423 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 ARID1AO14497 2285 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 TEX46H3BTG2 121 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 RAD1O60671 282 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 SLC43A1O75387 559 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 ENPP1P22413 925 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 ERVK-25P63136 954 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 FGFBP1Q14512 234 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 SLC36A2Q495M3 483 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 PLA1AQ53H76 456 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 C9orf50Q5SZB4 431 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 C2orf16Q68DN1 1984 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 LRRC28Q86X40 367 aaPredicted RBP13.86□□□□□ -0.19
USP28-214ENST00000545540 GID4Q8IVV7 300 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 DNAAF1Q8NEP3 725 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 COQ7Q99807 217 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 SEMA4CQ9C0C4 833 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 LYARQ9NX58 379 aaKnown RBP13.86□□□□□ -0.19
USP28-214ENST00000545540 ACTR10Q9NZ32 417 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 ING1Q9UK53 422 aaPredicted RBP13.86□□□□□ -0.19
USP28-214ENST00000545540 ADAM30Q9UKF2 790 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 SLC22A7Q9Y694 548 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 CABIN1Q9Y6J0 2220 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 DMDP11532 3685 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 TRBV2A0A0J9YWF9 115 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 BLOC1S5-TXNDC5H3BN57 136 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 LYPD3O95274 346 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 KLF8O95600 359 aaPredicted RBP13.86□□□□□ -0.19
USP28-214ENST00000545540 GPANK1O95872 356 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 HLA-DQB1P01920 261 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 HOXB2P14652 356 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 MTNR1BP49286 362 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 RPS15AP62244 130 aaKnown RBP13.86□□□□□ -0.19
USP28-214ENST00000545540 FAM209AQ5JX71 171 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 GJD3Q8N144 294 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 C10orf53Q8N6V4 93 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 DPCDQ9BVM2 203 aaPredicted RBP13.86□□□□□ -0.19
USP28-214ENST00000545540 TSPAN10Q9H1Z9 355 aaPredicted RBP13.86□□□□□ -0.19
USP28-214ENST00000545540 TMEM27Q9HBJ8 222 aa13.86□□□□□ -0.19
USP28-214ENST00000545540 GMDSO60547 372 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 SLC19A2O60779 497 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 HPXP02790 462 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 TCRBP04435 133 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 LGALS14Q8TCE9 139 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 RERGQ96A58 199 aaPredicted RBP13.85□□□□□ -0.19
USP28-214ENST00000545540 PELI1Q96FA3 418 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 BMFQ96LC9 184 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 KLHDC3Q9BQ90 382 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 TMEM106CQ9BVX2 250 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 LRIT1Q9P2V4 623 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 KLHL21Q9UJP4 597 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 C19orf53Q9UNZ5 99 aaPredicted RBP13.85□□□□□ -0.19
USP28-214ENST00000545540 A0A0A6YYC8 382 aaPredicted RBP13.85□□□□□ -0.19
USP28-214ENST00000545540 I3L1I5 382 aaPredicted RBP13.85□□□□□ -0.19
USP28-214ENST00000545540 SSNA1O43805 119 aa13.85□□□□□ -0.19
USP28-214ENST00000545540 RCBTB2O95199 551 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms