RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 MVDP53602 400 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 ITGADQ13349 1161 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 P2RY6Q15077 328 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 ATG16L1Q676U5 607 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 PRSS57Q6UWY2 283 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 ZNF621Q6ZSS3 439 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 BHLHA15Q7RTS1 189 aaPredicted RBP18.7■□□□□ 0.58
SCARB1-210ENST00000545493 WDR60Q8WVS4 1066 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 AKAP1Q92667 903 aaKnown RBP eCLIP18.7■□□□□ 0.58
SCARB1-210ENST00000545493 ZBTB18Q99592 522 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 TMBIM4Q9HC24 238 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 LIPT1Q9Y234 373 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 PMS2P2O95744 297 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 IDO1P14902 403 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 PAX1P15863 534 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 TXNL4AP83876 142 aaKnown RBP18.69■□□□□ 0.58
SCARB1-210ENST00000545493 LRRC74AQ0VAA2 488 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 GTDC1Q4AE62 458 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 BEND6Q5SZJ8 279 aaPredicted RBP18.69■□□□□ 0.58
SCARB1-210ENST00000545493 NCMAPQ5T1S8 102 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 NXNQ6DKJ4 435 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 Q71RC1 249 aaPredicted RBP18.69■□□□□ 0.58
SCARB1-210ENST00000545493 GALNT5Q7Z7M9 940 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 ADGRG3Q86Y34 549 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 CMIPQ8IY22 773 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 ZNF611Q8N823 705 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 OR9I1Q8NGQ6 314 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 LILRB1Q8NHL6 650 aaPredicted RBP18.69■□□□□ 0.58
SCARB1-210ENST00000545493 OR52B2Q96RD2 323 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 MANSC1Q9H8J5 431 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 RNF115Q9Y4L5 304 aa18.69■□□□□ 0.58
SCARB1-210ENST00000545493 TRIM64A6NGJ6 449 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 TRIM64BA6NI03 449 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 SLCO1B7G3V0H7 640 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 H7C1Q1 480 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 RFXANKO14593 260 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 RAMP1O60894 148 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 TFPIP10646 304 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 IGHV1-2P23083 117 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 IDH2P48735 452 aaKnown RBP18.68■□□□□ 0.58
SCARB1-210ENST00000545493 MRPL2Q5T653 305 aaKnown RBP18.68■□□□□ 0.58
SCARB1-210ENST00000545493 MTDHQ86UE4 582 aaKnown RBP18.68■□□□□ 0.58
SCARB1-210ENST00000545493 TMEM171Q8WVE6 324 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 NEUROG1Q92886 237 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 NKIRAS1Q9NYS0 192 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 ZIM2Q9NZV7 527 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 HDGFL3Q9Y3E1 203 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 DSPPQ9NZW4 1301 aa18.68■□□□□ 0.58
SCARB1-210ENST00000545493 TMEM72A0PK05 275 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 DNPH1O43598 174 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 SLC22A3O75751 556 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 IL6P05231 212 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 CCNA2P20248 432 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 ANXA11P50995 505 aaKnown RBP18.67■□□□□ 0.58
SCARB1-210ENST00000545493 EPS8Q12929 822 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 PDK3Q15120 406 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 STK11Q15831 433 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 ADAM5Q6NVV9 412 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 KBTBD8Q8NFY9 601 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 HSD17B8Q92506 261 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 SDR39U1Q9NRG7 319 aaPredicted RBP18.67■□□□□ 0.58
SCARB1-210ENST00000545493 ZNF701Q9NV72 531 aaPredicted RBP18.67■□□□□ 0.58
SCARB1-210ENST00000545493 NPAP1Q9NZP6 1156 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 EMC3Q9P0I2 261 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 OSGIN1Q9UJX0 560 aa18.67■□□□□ 0.58
SCARB1-210ENST00000545493 TMED7-TICAM2A0A0A6YYA0 188 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 FAAHO00519 579 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 CLOCKO15516 846 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 KRT75O95678 551 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 HEXAP06865 529 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 DBIP07108 87 aaKnown RBP18.66■□□□□ 0.58
SCARB1-210ENST00000545493 NR2F1P10589 423 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 IMPDH2P12268 514 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 ETFAP13804 333 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 NTF4P34130 210 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 LTBQ06643 244 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 BSPH1Q075Z2 132 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 CAPRIN1Q14444 709 aaKnown RBP18.66■□□□□ 0.58
SCARB1-210ENST00000545493 GSTA3Q16772 222 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 CLEC9AQ6UXN8 241 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 ZNF836Q6ZNA1 936 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 PIGXQ8TBF5 258 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 PIWIL2Q8TC59 973 aaKnown RBP18.66■□□□□ 0.58
SCARB1-210ENST00000545493 VPS33AQ96AX1 596 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 ZHX1-C8orf76Q96EF9 292 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 P2RX2Q9UBL9 471 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 TMED7Q9Y3B3 224 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 USF3Q68DE3 2245 aa18.66■□□□□ 0.58
SCARB1-210ENST00000545493 ZC3H12DA2A288 527 aaKnown RBP18.65■□□□□ 0.58
SCARB1-210ENST00000545493 KLF11O14901 512 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 IGHV3-9P01782 118 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 CD3EP07766 207 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 TACR3P29371 465 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 HTR3AP46098 478 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 POLR2HP52434 150 aaKnown RBP18.65■□□□□ 0.58
SCARB1-210ENST00000545493 SLC16A1P53985 500 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 MSANTD1Q6ZTZ1 278 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 VRK2Q86Y07 508 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 CCDC103Q8IW40 242 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 ZNF100Q8IYN0 542 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms