RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TGFBR3Q03167 851 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 TSPO2Q5TGU0 170 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 FAM169BQ8N8A8 192 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 ADAMTS15Q8TE58 950 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 NEU4Q8WWR8 484 aaPredicted RBP12.8□□□□□ -0.36
RTN3-214ENST00000545432 TMEM234Q8WY98 164 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 SDF2Q99470 211 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 DOK1Q99704 481 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 VRK1Q99986 396 aaPredicted RBP12.8□□□□□ -0.36
RTN3-214ENST00000545432 KATNB1Q9BVA0 655 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 SAP130Q9H0E3 1048 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 RAB1BQ9H0U4 201 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 SH3BP4Q9P0V3 963 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 ATP6V1HQ9UI12 483 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 FLVCR1Q9Y5Y0 555 aa12.8□□□□□ -0.36
RTN3-214ENST00000545432 IGHV1-18A0A0C4DH31 117 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 G3V2L1 256 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 SLU7O95391 586 aaKnown RBP12.79□□□□□ -0.36
RTN3-214ENST00000545432 WNT11O96014 354 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 GUSBP08236 651 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 UROSP10746 265 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 APEX1P27695 318 aaKnown RBP12.79□□□□□ -0.36
RTN3-214ENST00000545432 GCAP28676 217 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 HILS1P60008 231 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 LGALS3BPQ08380 585 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 MERTKQ12866 999 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 SLC17A1Q14916 467 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
RTN3-214ENST00000545432 FRMD7Q6ZUT3 714 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 SLC46A3Q7Z3Q1 461 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 SZRD1Q7Z422 152 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 CCDC103Q8IW40 242 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 C3orf56Q8N813 242 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 FAM71CQ8NEG0 241 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 OIT3Q8WWZ8 545 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 JADE3Q92613 823 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 TMEM45BQ96B21 275 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 ZHX1-C8orf76Q96EF9 292 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 ZNF696Q9H7X3 374 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 CHRNA9Q9UGM1 479 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 SPEF1Q9Y4P9 236 aa12.79□□□□□ -0.36
RTN3-214ENST00000545432 TGP01266 2768 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 TMEM129A0AVI4 362 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 B4DSR2 109 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 SLC28A1O00337 649 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 ANKRD28O15084 1053 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 AKAP10O43572 662 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 KRT16P08779 473 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 OR4A8P0C604 315 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 DAOP14920 347 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 MAGEA8P43361 318 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 ASMTP46597 345 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 CCT3P49368 545 aaKnown RBP12.78□□□□□ -0.36
RTN3-214ENST00000545432 POU3F1Q03052 451 aaPredicted RBP12.78□□□□□ -0.36
RTN3-214ENST00000545432 CARTPTQ16568 116 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 RFTN2Q52LD8 501 aaPredicted RBP12.78□□□□□ -0.36
RTN3-214ENST00000545432 PDZK1Q5T2W1 519 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 ANKRD16Q6P6B7 361 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 ADGRG3Q86Y34 549 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 OR56A1Q8NGH5 318 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 OR2T11Q8NH01 316 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 RFWD2Q8NHY2 731 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 OR5P2Q8WZ92 322 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 CCDC126Q96EE4 140 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 SLC38A2Q96QD8 506 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 RACGAP1Q9H0H5 632 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 TSPYL1Q9H0U9 437 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 OCEL1Q9H607 264 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 PIF1Q9H611 641 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 METTL17Q9H7H0 456 aaPredicted RBP12.78□□□□□ -0.36
RTN3-214ENST00000545432 ZNF442Q9H7R0 627 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 CTPS2Q9NRF8 586 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 BAIAP2L1Q9UHR4 511 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 SLC9A8Q9Y2E8 581 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 TMED5Q9Y3A6 229 aa12.78□□□□□ -0.36
RTN3-214ENST00000545432 SPIN1Q9Y657 262 aaPredicted RBP12.78□□□□□ -0.36
RTN3-214ENST00000545432 POC1B-GALNT4F8VUJ3 575 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 UGT2B17O75795 530 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 SNUPNO95149 360 aaKnown RBP12.77□□□□□ -0.37
RTN3-214ENST00000545432 IGLV1-44P01699 117 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 GSTA1P08263 222 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 PGM1P36871 562 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 DNAJB13P59910 316 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 SLC7A5Q01650 507 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 NAAAQ02083 359 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 R3HCC1LQ7Z5L2 792 aaKnown RBP12.77□□□□□ -0.37
RTN3-214ENST00000545432 ZIC4Q8N9L1 334 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 NUP37Q8NFH4 326 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 MAGEE2Q8TD90 523 aaPredicted RBP12.77□□□□□ -0.37
RTN3-214ENST00000545432 ACMSDQ8TDX5 336 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 TSSK3Q96PN8 268 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 UPB1Q9UBR1 384 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 EMCNQ9ULC0 261 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 PCDHB14Q9Y5E9 798 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 NUP214P35658 2090 aaPredicted RBP12.77□□□□□ -0.37
RTN3-214ENST00000545432 PKD1L1Q8TDX9 2849 aa12.77□□□□□ -0.37
RTN3-214ENST00000545432 ARPC4-TTLL3A0A0A6YYG9 625 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 CENPVL1A0A0U1RR11 272 aa12.76□□□□□ -0.37
RTN3-214ENST00000545432 LSM1O15116 133 aaKnown RBP12.76□□□□□ -0.37
RTN3-214ENST00000545432 FCMRO60667 390 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms