RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 NTN1O95631 604 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 DBIP07108 87 aaKnown RBP6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 NGFRP08138 427 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 CD63P08962 238 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 FBXO45P0C2W1 286 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 MST1P26927 711 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 C21orf33P30042 268 aaPredicted RBP6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 S100A5P33763 92 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 SOX6P35712 828 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 PTGDSP41222 190 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 ATP12AP54707 1039 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 GAS1P54826 345 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 RPS15P62841 145 aaKnown RBP6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 LSM11P83369 360 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 HOXC5Q00444 222 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 ZNF45Q02386 682 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 CHAF1BQ13112 559 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 C1DQ13901 141 aaKnown RBP6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 FGFBP1Q14512 234 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 TRAM2Q15035 370 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 SEC23BQ15437 767 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 BTBD16Q32M84 506 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 NDUFAF6Q330K2 333 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 ZNF791Q3KP31 576 aaPredicted RBP6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 TBC1D25Q3MII6 688 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 ZNF404Q494X3 552 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 FLYWCH1Q4VC44 716 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 EIPR1Q53HC9 387 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 ZNF311Q5JNZ3 666 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 MRPL2Q5T653 305 aaKnown RBP6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 PGBD2Q6P3X8 592 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 SLC29A4Q7RTT9 530 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 GRAMD2AQ8IUY3 354 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 CCDC103Q8IW40 242 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 SLC15A4Q8N697 577 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 UBE2FQ969M7 185 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 HSPBAP1Q96EW2 488 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 ADOQ96SZ5 270 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 DCSTAMPQ9H295 470 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 OCEL1Q9H607 264 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 SH2D2AQ9NP31 389 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 AKIP1Q9NQ31 210 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 CCDC59Q9P031 241 aaKnown RBP6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 OR10H1Q9Y4A9 318 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 UGT2A1Q9Y4X1 527 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 ATMQ13315 3056 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 BOD1L1Q8NFC6 3051 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 PCNX3Q9H6A9 2034 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 CPAMD8Q8IZJ3 1885 aa6.4□□□□□ -1.38
HMGCS2-204ENST00000544913 NSG1A0A0A6YYJ2 146 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 OR6C70A6NIJ9 312 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 H3BN98 237 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 AP3D1O14617 1153 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 TLX3O43711 291 aaPredicted RBP6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 PPM1BO75688 479 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 SULT1C4O75897 302 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 OR2J2O76002 312 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 ZFAND5O76080 213 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 SERPINA7P05543 415 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 LCKP06239 509 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 STSP08842 583 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 OCM2P0CE71 109 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 OCMP0CE72 109 aaPredicted RBP6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 ADORA3P0DMS8 318 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 POU2F1P14859 743 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 TBXA2RP21731 343 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 POU1F1P28069 291 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 TGFBR2P37173 567 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 ACAA2P42765 397 aaKnown RBP6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 RFX3P48380 749 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 GIPRP48546 466 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 RGS6P49758 472 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 PPP5CP53041 499 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 FBXW4P57775 412 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 VBP1P61758 197 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 CDK5Q00535 292 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 PLCXD2Q0VAA5 305 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 FOXC1Q12948 553 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 LARS2Q15031 903 aaKnown RBP6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 EXT1Q16394 746 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 DECR1Q16698 335 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 ZSWIM7Q19AV6 140 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 ARMCX4Q5H9R4 360 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 ZNF468Q5VIY5 522 aaPredicted RBP6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 C19orf48Q6RUI8 117 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 ZNF227Q86WZ6 799 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 PEX5LQ8IYB4 626 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 CYP4Z2PQ8N1L4 340 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 POGLUT1Q8NBL1 392 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 PROKR2Q8NFJ6 384 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 MCFD2Q8NI22 146 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 SLC7A13Q8TCU3 470 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 SLC38A2Q96QD8 506 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 RASL10BQ96S79 203 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 MGLLQ99685 303 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 G6PC3Q9BUM1 346 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 SCNM1Q9BWG6 230 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 MND1Q9BWT6 205 aa6.4□□□□□ -1.39
HMGCS2-204ENST00000544913 SLIRPQ9GZT3 109 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms