RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 FUT1P19526 365 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 EGR4Q05215 589 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 C12orf73Q69YU5 71 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 GALNT16Q8N428 558 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 CNIH3Q8TBE1 160 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 HDAC2Q92769 488 aaKnown RBP27.63■■■□□ 2.01
CCM2-219ENST00000544363 RASSF1Q9NS23 344 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 MED17Q9NVC6 651 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 IMPAD1Q9NX62 359 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 TMED7-TICAM2A0A0A6YYA0 188 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 ETV2O00321 342 aaPredicted RBP27.63■■■□□ 2.01
CCM2-219ENST00000544363 WISP1O95388 367 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 ZNF41P51814 821 aaPredicted RBP27.63■■■□□ 2.01
CCM2-219ENST00000544363 SOX8P57073 446 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 LAIR2Q6ISS4 152 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 POMZP3Q6PJE2 187 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 ADGRG3Q86Y34 549 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 PLCZ1Q86YW0 608 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 IQCF1Q8N6M8 205 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 OR4K17Q8NGC6 315 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 TBC1D23Q9NUY8 699 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 FBXL2Q9UKC9 423 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 TMED7Q9Y3B3 224 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 EML6Q6ZMW3 1958 aa27.63■■■□□ 2.01
CCM2-219ENST00000544363 SNX4O95219 450 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 P04436 131 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 CCNA2P20248 432 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 SMSP52788 366 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 OC90Q02509 493 aaPredicted RBP27.62■■■□□ 2.01
CCM2-219ENST00000544363 ZNF227Q86WZ6 799 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 OR13C2Q8NGS9 318 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 RHOXF1Q8NHV9 184 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 FANK1Q8TC84 345 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 TSSK6Q9BXA6 273 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 PTGES2Q9H7Z7 377 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 SACM1LQ9NTJ5 587 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 ZNF226Q9NYT6 803 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 AASSQ9UDR5 926 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 SCOCQ9UIL1 159 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 VDAC3Q9Y277 283 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 SIGLEC7Q9Y286 467 aa27.62■■■□□ 2.01
CCM2-219ENST00000544363 SNPHO15079 494 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 PTP4A3O75365 173 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 RCBTB2O95199 551 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 SPINK2P20155 84 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 KCTD21Q4G0X4 260 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 CRTC2Q53ET0 693 aaPredicted RBP27.61■■■□□ 2.01
CCM2-219ENST00000544363 SLC25A53Q5H9E4 307 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 RBM48Q5RL73 367 aaKnown RBP27.61■■■□□ 2.01
CCM2-219ENST00000544363 RPL13AP3Q6NVV1 102 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 SLC27A4Q6P1M0 643 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 TMEM154Q6P9G4 183 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 CASP12Q6UXS9 341 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 OAFQ86UD1 273 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 PSD4Q8NDX1 1056 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 ADNPQ9H2P0 1102 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 OR52D1Q9H346 318 aa27.61■■■□□ 2.01
CCM2-219ENST00000544363 SUSD5O60279 629 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 HCN1O60741 890 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 OR7A10O76100 309 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 CH25HO95992 272 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 CD96P40200 585 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 CASRP41180 1078 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 APOBEC1P41238 236 aaKnown RBP27.6■■■□□ 2.01
CCM2-219ENST00000544363 SLC9A3P48764 834 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 FXYD6P3P58550 94 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 PLPPR5Q32ZL2 321 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 ACSM5Q6NUN0 579 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 SLC46A3Q7Z3Q1 461 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 C1GALT1C1Q96EU7 318 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 TMEM41AQ96HV5 264 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 SAMD8Q96LT4 415 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 SCNM1Q9BWG6 230 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 LRFN1Q9P244 771 aa27.6■■■□□ 2.01
CCM2-219ENST00000544363 TMEM72A0PK05 275 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 ZNF891A8MT65 544 aaPredicted RBP27.59■■■□□ 2.01
CCM2-219ENST00000544363 SLC25A12O75746 678 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 MASP1P48740 699 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 TOP3AQ13472 1001 aaPredicted RBP27.59■■■□□ 2.01
CCM2-219ENST00000544363 ZBED5Q49AG3 693 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 CLEC12AQ5QGZ9 265 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 APH1BQ8WW43 257 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 FGF11Q92914 225 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 UTP23Q9BRU9 249 aaKnown RBP27.59■■■□□ 2.01
CCM2-219ENST00000544363 WASF3Q9UPY6 502 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 MED13Q9UHV7 2174 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 CPAMD8Q8IZJ3 1885 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 FREM2Q5SZK8 3169 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 FAM47E-STBD1D6RA91 191 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 G3V3Y1 287 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 MPZL2O60487 215 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 WBP4O75554 376 aaKnown RBP27.59■■■□□ 2.01
CCM2-219ENST00000544363 SMNDC1O75940 238 aaKnown RBP eCLIP27.59■■■□□ 2.01
CCM2-219ENST00000544363 GABRB1P18505 474 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 TUBA3CQ13748 450 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 ZNF74Q16587 644 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 TUBA3EQ6PEY2 450 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 SMARCD3Q6STE5 483 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 PTCHD4Q6ZW05 846 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 OR1J4Q8NGS1 313 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms