RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 KLHL15Q96M94 604 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 OR5B2Q96R09 309 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SEPHS2Q99611 448 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TP63Q9H3D4 680 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TINAGQ9UJW2 476 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 FAM32AQ9Y421 112 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 KALRNO60229 2985 aa13.04□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TCRBV5S2A0A599 114 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 H0YC42 278 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PYCARD-AS1I3L0S3 204 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TNFSF11O14788 317 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 WDR1O75083 606 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PNMTP11086 282 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 GABRA1P14867 456 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 FKBP2P26885 142 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SHC1P29353 583 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CDH12P55289 794 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TPD52P55327 224 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PIN1Q13526 163 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SGCBQ16585 318 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SYT14P1Q58G82 188 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 EMC4Q5J8M3 183 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PDSS1Q5T2R2 415 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 C1orf146Q5VVC0 180 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 C3P1Q6ZMU1 363 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ESPNLQ6ZVH7 1005 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ATG4DQ86TL0 474 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 GGNQ86UU5 652 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CYP4Z1Q86W10 505 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SPATA24Q86W54 205 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 DOLPP1Q86YN1 238 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PHF10Q8WUB8 498 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 POP5Q969H6 163 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PRRC1Q96M27 445 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 POLR2J2Q9GZM3 115 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 POLR2J3Q9H1A7 115 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 C12orf10Q9HB07 376 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SLC7A7Q9UM01 511 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 AQP12BA6NM10 295 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 AHRRA9YTQ3 701 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 J3KTA2 159 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 hCG_2039718K7EN88 272 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ZNF208O43345 1280 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CHP2O43745 196 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 FABP3P05413 133 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ITGA2P17301 1181 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 EIF1AXP47813 144 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ERFP50548 548 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 MAP2K6P52564 334 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CLDN15P56746 228 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SF3B4Q15427 424 aaKnown RBP eCLIP13.03□□□□□ -0.328e-7■■■□□ 18.2
TNFRSF1A-216ENST00000543995 SWT1Q5T5J6 900 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 C1QL3Q5VWW1 255 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 HBMQ6B0K9 141 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PPP4R4Q6NUP7 873 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 LSRQ86X29 649 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 AQP12AQ8IXF9 295 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 OR2V1Q8NHB1 315 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SLC38A4Q969I6 547 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 DNAJA3Q96EY1 480 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SLC41A3Q96GZ6 507 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TUBA1CQ9BQE3 449 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 FNDC11Q9BVV2 318 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 OR11A1Q9GZK7 315 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 RIMS3Q9UJD0 308 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 AURKCQ9UQB9 309 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ENPP4Q9Y6X5 453 aa13.03□□□□□ -0.32
TNFRSF1A-216ENST00000543995 MPDZO75970 2070 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 A0A0J9YW62 118 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 A0A1W2PNR3 127 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 A8MVM7 634 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SEMA7AO75326 666 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 OR5F1O95221 314 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 SEMG1P04279 462 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 STSP08842 583 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PLA2G2AP14555 144 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ACVR2AP27037 513 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 PTGER4P35408 488 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CA7P43166 264 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CARD18P57730 90 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 VLDLRP98155 873 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CHRNB3Q05901 458 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ST3GAL3Q11203 375 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CTU2Q2VPK5 515 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 FAM98BQ52LJ0 330 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 GDF7Q7Z4P5 450 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TSPYL5Q86VY4 417 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 OR10D3Q8NH80 312 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RAB3IPQ96QF0 476 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 TIGARQ9NQ88 270 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 NDUFAF4Q9P032 175 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 RHCGQ9UBD6 479 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 A4GNTQ9UNA3 340 aa13.02□□□□□ -0.33
TNFRSF1A-216ENST00000543995 CHD6Q8TD26 2715 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ESPL1Q14674 2120 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 A0A087WUJ7 227 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 DHRS12A0PJE2 317 aa13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ZC3H12DA2A288 527 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-216ENST00000543995 ERICH4A6NGS2 130 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms