RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 C12orf43Q96C57 262 aaKnown RBP18.09■□□□□ 0.49
COPS7A-218ENST00000543939 PLEKHA8Q96JA3 519 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 NCDNQ9UBB6 729 aa18.09■□□□□ 0.49
COPS7A-218ENST00000543939 SOCS6O14544 535 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 OR2J2O76002 312 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 DKK1O94907 266 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 RAB40ALP0C0E4 278 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 TACR3P29371 465 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 SLC9A3P48764 834 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 CBFBQ13951 182 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 TRIP6Q15654 476 aaKnown RBP18.08■□□□□ 0.48
COPS7A-218ENST00000543939 TOMM34Q15785 309 aaPredicted RBP18.08■□□□□ 0.48
COPS7A-218ENST00000543939 AADACL4Q5VUY2 407 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 SLC46A3Q7Z3Q1 461 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 GLRX5Q86SX6 157 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 PRSS33Q8NF86 280 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 OR11G2Q8NGC1 345 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 C9orf43Q8TAL5 461 aaPredicted RBP18.08■□□□□ 0.48
COPS7A-218ENST00000543939 M1APQ8TC57 530 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 SLC22A8Q8TCC7 542 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 DUSP19Q8WTR2 217 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 MMP25Q9NPA2 562 aa18.08■□□□□ 0.48
COPS7A-218ENST00000543939 WARS2Q9UGM6 360 aaKnown RBP18.08■□□□□ 0.48
COPS7A-218ENST00000543939 GMFGO60234 142 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 TRMUO75648 421 aaKnown RBP18.07■□□□□ 0.48
COPS7A-218ENST00000543939 OR7A10O76100 309 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 SLC2A10O95528 541 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 CELA2AP08217 269 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 FBXO45P0C2W1 286 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 PSMB9P28065 219 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 TMED10P49755 219 aaKnown RBP18.07■□□□□ 0.48
COPS7A-218ENST00000543939 GAS1P54826 345 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 HES3Q5TGS1 186 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 RTL4Q6ZR62 310 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 SLC15A4Q8N697 577 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 B4GALNT2Q8NHY0 566 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 GPR119Q8TDV5 335 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 IFT27Q9BW83 186 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 FUNDC2Q9BWH2 189 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 MRPS18AQ9NVS2 196 aaKnown RBP18.07■□□□□ 0.48
COPS7A-218ENST00000543939 TCFL5Q9UL49 500 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 BAIAP2Q9UQB8 552 aa18.07■□□□□ 0.48
COPS7A-218ENST00000543939 LRRN3E7EW58 273 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 H3BMQ9 156 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 CDC40O60508 579 aaKnown RBP eCLIP18.06■□□□□ 0.48
COPS7A-218ENST00000543939 ADORA3P0DMS8 318 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 TCN2P20062 427 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 ST13P50502 369 aaKnown RBP18.06■□□□□ 0.48
COPS7A-218ENST00000543939 EGR4Q05215 589 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 TMEM44Q2T9K0 475 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 NDUFAF7Q7L592 441 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 LRRC17Q8N6Y2 441 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 YIPF6Q96EC8 236 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 CRELD1Q96HD1 420 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 TMEM80Q96HE8 168 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 COG8Q96MW5 612 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 RASL10BQ96S79 203 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 TAS2R16Q9NYV7 291 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 FOXJ2Q9P0K8 574 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 OSGIN1Q9UJX0 560 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 SNTNA6NMZ2 147 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 NUDT14O95848 222 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 PTHP01270 115 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 GP1BBP13224 206 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 PCSK6P29122 969 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 SLC6A6P31641 620 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 FOXK2Q01167 660 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 C17orf67Q0P5P2 114 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 QPRTQ15274 297 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 CACTIN-AS1Q8N1I8 211 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 LIPHQ8WWY8 451 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 FN3KQ9H479 309 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 HINT3Q9NQE9 182 aaKnown RBP18.06■□□□□ 0.48
COPS7A-218ENST00000543939 ZNF337Q9Y3M9 751 aa18.06■□□□□ 0.48
COPS7A-218ENST00000543939 TRIM64BA6NI03 449 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 VGLL3A8MV65 326 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 RPS18P62269 152 aaKnown RBP18.05■□□□□ 0.48
COPS7A-218ENST00000543939 ZNF74Q16587 644 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 NTRK2Q16620 822 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 COL28A1Q2UY09 1125 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 KLHL22Q53GT1 634 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 TMEM164Q5U3C3 297 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 RNLSQ5VYX0 342 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 NXNL2Q5VZ03 156 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 SLC16A12Q6ZSM3 486 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 PPP1R32Q7Z5V6 425 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 ANKRD13BQ86YJ7 626 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 RAB2BQ8WUD1 216 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 CMC2Q9NRP2 79 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 ENPP5Q9UJA9 477 aa18.05■□□□□ 0.48
COPS7A-218ENST00000543939 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.05■□□□□ 0.48
COPS7A-218ENST00000543939 FARSAQ9Y285 508 aaKnown RBP18.05■□□□□ 0.48
COPS7A-218ENST00000543939 CPAMD8Q8IZJ3 1885 aa18.04■□□□□ 0.48
COPS7A-218ENST00000543939 NSG1A0A0A6YYJ2 146 aa18.04■□□□□ 0.48
COPS7A-218ENST00000543939 M0R082 166 aa18.04■□□□□ 0.48
COPS7A-218ENST00000543939 NOL3O60936 208 aaKnown RBP18.04■□□□□ 0.48
COPS7A-218ENST00000543939 NDUFB2O95178 105 aa18.04■□□□□ 0.48
COPS7A-218ENST00000543939 ATE1O95260 518 aa18.04■□□□□ 0.48
COPS7A-218ENST00000543939 PPP1R3DO95685 299 aa18.04■□□□□ 0.48
COPS7A-218ENST00000543939 CDK4P11802 303 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms