RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 MGAT4AQ9UM21 535 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 A0A0G2JK05 382 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 SPTY2D1-AS1A0A0U1RR47 76 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 PLPP2O43688 288 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 ICMTO60725 284 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 RFPL3O75679 317 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 SOX30O94993 753 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 MT-ND5P03915 603 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 SYPP08247 313 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 CD3GP09693 182 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 ZNF10P21506 573 aaPredicted RBP11.55□□□□□ -0.56
RNF4-222ENST00000541204 NOS3P29474 1203 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 SLC36A2Q495M3 483 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 KIAA0895LQ68EN5 471 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 DGAT2L6Q6ZPD8 337 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 METTL27Q8N6F8 245 aaPredicted RBP11.55□□□□□ -0.56
RNF4-222ENST00000541204 ZNF431Q8TF32 576 aaPredicted RBP11.55□□□□□ -0.56
RNF4-222ENST00000541204 TMEM239Q8WW34 195 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 KCTD12Q96CX2 325 aaKnown RBP11.55□□□□□ -0.56
RNF4-222ENST00000541204 IFT27Q9BW83 186 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 TTTY10Q9BZA0 68 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 GHITMQ9H3K2 345 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 FN3KQ9H479 309 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 POT1Q9NUX5 634 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 USP36Q9P275 1121 aaKnown RBP11.55□□□□□ -0.56
RNF4-222ENST00000541204 ZNF223Q9UK11 482 aaPredicted RBP11.55□□□□□ -0.56
RNF4-222ENST00000541204 HS3ST3A1Q9Y663 406 aa11.55□□□□□ -0.56
RNF4-222ENST00000541204 A0A0J9YY10 115 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 A0A1W2PPK0 400 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 PRR23D1E9PI22 279 aaPredicted RBP11.54□□□□□ -0.56
RNF4-222ENST00000541204 MEN1O00255 615 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 PRR23D2P0DMB1 279 aaPredicted RBP11.54□□□□□ -0.56
RNF4-222ENST00000541204 IL9P15248 144 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 STOMP27105 288 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 OR12D2P58182 307 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 UBE2IP63279 158 aaKnown RBP11.54□□□□□ -0.56
RNF4-222ENST00000541204 FOXK2Q01167 660 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 ERV3-1Q14264 604 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 ARHGAP11BQ3KRB8 267 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 ARMC6Q6NXE6 501 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 USP53Q70EK8 1073 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 SYT9Q86SS6 491 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 RANBP3LQ86VV4 465 aaPredicted RBP11.54□□□□□ -0.56
RNF4-222ENST00000541204 ZNF655Q8N720 491 aaPredicted RBP11.54□□□□□ -0.56
RNF4-222ENST00000541204 COX18Q8N8Q8 333 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 CYB561A3Q8NBI2 242 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 OR13C2Q8NGS9 318 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 ANGPTL6Q8NI99 470 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 ZDHHC1Q8WTX9 485 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 SCMH1Q96GD3 660 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 MED30Q96HR3 178 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 SDF2Q99470 211 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 ZFP64Q9NPA5 681 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 SLCO1C1Q9NYB5 712 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 STMN3Q9NZ72 180 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 ING4Q9UNL4 249 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 MRPS7Q9Y2R9 242 aaKnown RBP11.54□□□□□ -0.56
RNF4-222ENST00000541204 TRAV27A0A087WT01 109 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 A0A0B4J203 849 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 TRAPPC13A5PLN9 417 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 LEUTXA8MZ59 168 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 GYPBP06028 91 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 CXCL3P19876 107 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 OR1Q1Q15612 314 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 ZBTB37Q5TC79 503 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 OOSP2Q86WS3 158 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 LNX2Q8N448 690 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 TOR1AIP2Q8NFQ8 470 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 HCN3Q9P1Z3 774 aa11.54□□□□□ -0.56
RNF4-222ENST00000541204 A0A0A6YYC8 382 aaPredicted RBP11.53□□□□□ -0.56
RNF4-222ENST00000541204 GXYLT2A0PJZ3 443 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 I3L1I5 382 aaPredicted RBP11.53□□□□□ -0.56
RNF4-222ENST00000541204 CYR61O00622 381 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 HYAL3O43820 417 aaPredicted RBP11.53□□□□□ -0.56
RNF4-222ENST00000541204 TCRBP04435 133 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 SAGP10523 405 aaPredicted RBP11.53□□□□□ -0.56
RNF4-222ENST00000541204 GIFP27352 417 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 GABRA3P34903 492 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 MAT1AQ00266 395 aaKnown RBP11.53□□□□□ -0.56
RNF4-222ENST00000541204 ZNF85Q03923 595 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 DUSP8Q13202 625 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 ACSM3Q53FZ2 586 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 MRPL2Q5T653 305 aaKnown RBP11.53□□□□□ -0.56
RNF4-222ENST00000541204 SIGIRRQ6IA17 410 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 PYHIN1Q6K0P9 492 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 TOMM5Q8N4H5 51 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 OR11H4Q8NGC9 324 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 OR5J2Q8NH18 312 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 SUN5Q8TC36 379 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 PGLYRP3Q96LB9 341 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 ZFP3Q96NJ6 502 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 DPAGT1Q9H3H5 408 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 CMC2Q9NRP2 79 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 KCNE5Q9UJ90 142 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 CA14Q9ULX7 337 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 SPACA6W5XKT8 324 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 TEX13CA0A0J9YWL9 993 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 A0A1W2PRG6 482 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 C7orf66A4D0T2 115 aa11.53□□□□□ -0.56
RNF4-222ENST00000541204 CDHR4A6H8M9 788 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms