RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 LGALS12Q96DT0 336 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 KTI12Q96EK9 354 aaPredicted RBP11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 SGTBQ96EQ0 304 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 LIN37Q96GY3 246 aaPredicted RBP11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 MOGAT1Q96PD6 335 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 TSC22D3Q99576 134 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 TAPBPLQ9BX59 468 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 STRADBQ9C0K7 418 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 ADAM19Q9H013 955 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 ZNF700Q9H0M5 742 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 KRCC1Q9NPI7 259 aaPredicted RBP11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 CNOT2Q9NZN8 540 aaKnown RBP11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 MYOTQ9UBF9 498 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 PCNX2A6NKB5 2137 aa11.18□□□□□ -0.62
AP003559.1-201ENST00000540906 A0A1W2PPW3 197 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 EFCAB10A6NFE3 127 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 ELOA3DA6NLF2 546 aaPredicted RBP11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 IMPA2O14732 288 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 MRPS14O60783 128 aaKnown RBP11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 PIPP12273 146 aaPredicted RBP11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 ITPKBP27987 946 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 LIPAP38571 399 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 NRG3P56975 720 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 INPP5JQ15735 1006 aaPredicted RBP11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 ELOA3BQ3SY89 546 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 HES3Q5TGS1 186 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 POMZP3Q6PJE2 187 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 B3GNT6Q6ZMB0 384 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 OAFQ86UD1 273 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 LNX2Q8N448 690 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 SVOPQ8N4V2 548 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 ELOA3Q8NG57 546 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 OR10G3Q8NGC4 313 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 OR52I1Q8NGK6 324 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 OR8K3Q8NH51 312 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 OR5W2Q8NH69 310 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 MOSPD2Q8NHP6 518 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 ZNF563Q8TA94 476 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 GPR119Q8TDV5 335 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 TAAR9Q96RI9 348 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 RASL10BQ96S79 203 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 IFT27Q9BW83 186 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 PTTG2Q9NZH5 202 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 AKAP7Q9P0M2 348 aaPredicted RBP11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 WARS2Q9UGM6 360 aaKnown RBP11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 OSGIN1Q9UJX0 560 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 EML6Q6ZMW3 1958 aa11.17□□□□□ -0.62
AP003559.1-201ENST00000540906 MCIDASD6RGH6 385 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 CDC40O60508 579 aaKnown RBP eCLIP11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 EIF4E2O60573 245 aaKnown RBP11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 OR7A10O76100 309 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 JMJD7P0C870 316 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 NOS3P29474 1203 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 GRK5P34947 590 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 TGFBR1P36897 503 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 CD79BP40259 229 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 FOLR3P41439 243 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 SLC1A3P43003 542 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 SLC9A3P48764 834 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 RAB15P59190 212 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 E2F1Q01094 437 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 FOXK2Q01167 660 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 Q0VFX4 171 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 TUBA3CQ13748 450 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 QPRTQ15274 297 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 CSRP2Q16527 193 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 COL28A1Q2UY09 1125 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 C3orf38Q5JPI3 329 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 C6orf15Q6UXA7 325 aaPredicted RBP11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 CPOQ8IVL8 374 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 CDK20Q8IZL9 346 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 Q96MT0 163 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 SLC38A2Q96QD8 506 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 DCUN1D5Q9BTE7 237 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 CDCA4Q9BXL8 241 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 DEFB126Q9BYW3 111 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 ZNF160Q9HCG1 818 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 ENPP5Q9UJA9 477 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 FBXL4Q9UKA2 621 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 LSM2Q9Y333 95 aaKnown RBP11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 TRIM64BA6NI03 449 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 PLD2O14939 933 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 PRODHO43272 600 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 HCN1O60741 890 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 CYC1P08574 325 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 CLUP10909 449 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 TCN2P20062 427 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 TTKP33981 857 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 SOX3P41225 446 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 EFR3AQ14156 821 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 SPCS2Q15005 226 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 PLBD1Q6P4A8 553 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 DEFB124Q8NES8 71 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 OR5L2Q8NGL0 311 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 B4GALNT2Q8NHY0 566 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 RPL3LQ92901 407 aaKnown RBP11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 RNFT2Q96EX2 444 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 CDC6Q99741 560 aa11.16□□□□□ -0.62
AP003559.1-201ENST00000540906 DDA1Q9BW61 102 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms