RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 RAB1BQ9H0U4 201 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 SLITRK2Q9H156 845 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 CDC42EP4Q9H3Q1 356 aaKnown RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 RHOJQ9H4E5 214 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 TMEM185BQ9H7F4 350 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 MED17Q9NVC6 651 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 HIF1ANQ9NWT6 349 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 TAS2R9Q9NYW1 312 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 NUDT4Q9NZJ9 180 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 FLRT3Q9NZU0 649 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 ING1Q9UK53 422 aaPredicted RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 MRTO4Q9UKD2 239 aaKnown RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 ACOT9Q9Y305 439 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 PSAT1Q9Y617 370 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 DNAH9Q9NYC9 4486 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 CCT8L1PA6NM43 557 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 GJE1A6NN92 205 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF724A8MTY0 619 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 GMFGO60234 142 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 COQ9O75208 318 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 NME6O75414 186 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 BANF1O75531 89 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 RAD51DO75771 328 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 PDE5AO76074 875 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 UTS2O95399 124 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 BCL10O95999 233 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 JUNP05412 331 aaKnown RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ERCC1P07992 297 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 MSMBP08118 114 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 NGFRP08138 427 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 CTAGE8P0CG41 777 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 DAOP14920 347 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 DDX5P17844 614 aaKnown RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ZFP36P26651 326 aaKnown RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ELK4P28324 431 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 MSX2P35548 267 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 PPOXP50336 477 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 RAB10P61026 200 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 TRA2BP62995 288 aaKnown RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF155Q12901 538 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 EFNB3Q15768 340 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 RNASEH2BQ5TBB1 312 aaKnown RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 FBXW9Q5XUX1 488 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 STEAP4Q687X5 459 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 OR7E24Q6IFN5 339 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 APOOLQ6UXV4 268 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 COMMD6Q7Z4G1 85 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 C1QL2Q7Z5L3 287 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 GALNT5Q7Z7M9 940 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ISCA2Q86U28 154 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 MISPQ8IVT2 679 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 CTAGE4Q8IX94 777 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF100Q8IYN0 542 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 CMTM4Q8IZR5 234 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 METTL4Q8N3J2 472 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 C17orf78Q8N4C9 275 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 BPIFB2Q8N4F0 458 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 SYT14Q8NB59 555 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 OR9A2Q8NGT5 310 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 OR51F2Q8NH61 342 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 POC1BQ8TC44 478 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 Q8TCH9 128 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 SNX33Q8WV41 574 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 NEU4Q8WWR8 484 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF75CPQ92670 426 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 EXT2Q93063 718 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 MAGOHBQ96A72 148 aaKnown RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 TM4SF18Q96CE8 201 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 LRRC39Q96DD0 335 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 UBXN10Q96LJ8 280 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 C8orf49Q96NF6 230 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 NPAS1Q99742 590 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 PKP2Q99959 881 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 MRPL1Q9BYD6 325 aaKnown RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 PLK3Q9H4B4 646 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ALG9Q9H6U8 611 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 CXorf36Q9H7Y0 433 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ANKRA2Q9H9E1 313 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 UNKLQ9H9P5 680 aaKnown RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ZMAT3Q9HA38 289 aaKnown RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 NTN4Q9HB63 628 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ESM1Q9NQ30 184 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 PFDN4Q9NQP4 134 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 DDX28Q9NUL7 540 aaKnown RBP3.99□□□□□ -1.77
SNHG1-214ENST00000540865 NSMCE4AQ9NXX6 385 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 SCOCQ9UIL1 159 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 UTS2RQ9UKP6 389 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 AMDHD2Q9Y303 409 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 ANGPTL3Q9Y5C1 460 aa3.99□□□□□ -1.77
SNHG1-214ENST00000540865 A0A087WV62 115 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 GOLGA6L10A0A0M3HER8 536 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 TTC36A6NLP5 189 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 SYCE1LA8MT33 242 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 SUPT3HB4E1H0 165 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 ATP6V1G2-DDX39BF2Z307 99 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 UBXN8O00124 270 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 KIF2AO00139 706 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF195O14628 629 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 EFNA2O43921 213 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 CYTIPO60759 359 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms