RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 ABLIM2Q6H8Q1 611 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 C16orf62Q7Z3J2 963 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 FNDC5Q8NAU1 212 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 OR5D16Q8NGK9 328 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 OR5AK3PQ8NH89 298 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 OIT3Q8WWZ8 545 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF524Q96C55 264 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 COQ8BQ96D53 544 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 PIMREGQ9BSJ6 248 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 DUSP26Q9BV47 211 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 C1QTNF6Q9BXI9 259 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 C12orf65Q9H3J6 166 aaKnown RBP10.97□□□□□ -0.65
COPS7A-211ENST00000540408 CHRNA9Q9UGM1 479 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 MKLN1Q9UL63 735 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 PCDHGB4Q9UN71 923 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 SLC35A3Q9Y2D2 325 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 CUBNO60494 3623 aa10.97□□□□□ -0.65
COPS7A-211ENST00000540408 ANK3Q12955 4377 aaKnown RBP10.96□□□□□ -0.65
COPS7A-211ENST00000540408 LOC100289279A0A1B0GTE1 492 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 ZNF716A6NP11 495 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 NDUFS8O00217 210 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 NPHS1O60500 1241 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 EIF1BO60739 113 aaKnown RBP10.96□□□□□ -0.65
COPS7A-211ENST00000540408 UGT2B17O75795 530 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 SLU7O95391 586 aaKnown RBP10.96□□□□□ -0.65
COPS7A-211ENST00000540408 AGR2O95994 175 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 WNT11O96014 354 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 FAM153BP0C7A2 387 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 PDLIM4P50479 330 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 OR2B6P58173 313 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 PHC1P78364 1004 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 SQLEQ14534 574 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 ARHGAP11BQ3KRB8 267 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 FAM153CQ494X1 144 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 ATAD3BQ5T9A4 648 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 IL23RQ5VWK5 629 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 KLHL24Q6TFL4 600 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 B3GLCTQ6Y288 498 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 GRINAQ7Z429 371 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 C6orf120Q7Z4R8 191 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 C17orf78Q8N4C9 275 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 NAA11Q9BSU3 229 aaPredicted RBP10.96□□□□□ -0.65
COPS7A-211ENST00000540408 C1orf50Q9BV19 199 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 C19orf24Q9BVV8 132 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 CHODLQ9H9P2 273 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 CTPS2Q9NRF8 586 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 MALT1Q9UDY8 824 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 DCTN4Q9UJW0 460 aa10.96□□□□□ -0.65
COPS7A-211ENST00000540408 ALPK2Q86TB3 2170 aa10.96□□□□□ -0.66
COPS7A-211ENST00000540408 SMIM23A6NLE4 172 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 TMEM233B4DJY2 109 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 FCMRO60667 390 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 CHRNGP07510 517 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 APEHP13798 732 aaKnown RBP10.95□□□□□ -0.66
COPS7A-211ENST00000540408 RYKP34925 604 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 HTR3AP46098 478 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 SLC16A1P53985 500 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 PRPS1P60891 318 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 RPS26P62854 115 aaKnown RBP10.95□□□□□ -0.66
COPS7A-211ENST00000540408 HBA1P69905 142 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 MAD2L1Q13257 205 aaPredicted RBP10.95□□□□□ -0.66
COPS7A-211ENST00000540408 GGTLC2Q14390 218 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 PCLAFQ15004 111 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 PGS1Q32NB8 556 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 UGT3A2Q3SY77 523 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 C6orf136Q5SQH8 315 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 FAM120AOSQ5T036 256 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 CASP12Q6UXS9 341 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 KRTCAP2Q8N6L1 136 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 ZNF540Q8NDQ6 660 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 C1orf162Q8NEQ5 155 aaPredicted RBP10.95□□□□□ -0.66
COPS7A-211ENST00000540408 AGR3Q8TD06 166 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 UBLCP1Q8WVY7 318 aaPredicted RBP10.95□□□□□ -0.66
COPS7A-211ENST00000540408 PMM1Q92871 262 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 FBXO17Q96EF6 278 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 SLC35G5Q96KT7 338 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 KCNS3Q9BQ31 491 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 CCDC106Q9BWC9 280 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 TXLNGYQ9BZA5 131 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 MYOZ1Q9NP98 299 aaPredicted RBP10.95□□□□□ -0.66
COPS7A-211ENST00000540408 TMEM181Q9P2C4 612 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 TRAPPC4Q9Y296 219 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 SLC9A8Q9Y2E8 581 aa10.95□□□□□ -0.66
COPS7A-211ENST00000540408 ITGA5P08648 1049 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 PAX7P23759 505 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 PGM1P36871 562 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 NR4A2P43354 598 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 SNRPD2P62316 118 aaKnown RBP10.94□□□□□ -0.66
COPS7A-211ENST00000540408 SLC35A1P78382 337 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 CARTPTQ16568 116 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 IQCCQ4KMZ1 466 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 C9orf135Q5VTT2 229 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 ABHD12BQ7Z5M8 362 aaPredicted RBP10.94□□□□□ -0.66
COPS7A-211ENST00000540408 CCDC103Q8IW40 242 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 C4orf33Q8N1A6 199 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 ARFGAP2Q8N6H7 521 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 ARIH2OSQ8N7S6 290 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 OR52E4Q8NGH9 312 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 XAGE5Q8WWM1 108 aa10.94□□□□□ -0.66
COPS7A-211ENST00000540408 C3orf49Q96BT1 292 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms