RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PPM1FP49593 454 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-210ENST00000539599 CLDN20P56880 219 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 DGCR2P98153 550 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 ACSM1Q08AH1 577 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 ADAM15Q13444 863 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 STPG1Q5TH74 334 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 HBMQ6B0K9 141 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 MZT2AQ6P582 158 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 KIAA1143Q96AT1 154 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-210ENST00000539599 ELSPBP1Q96BH3 223 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 SLC22A18Q96BI1 424 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 OR14A2Q96R54 314 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 NMNAT3Q96T66 252 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 ACOXLQ9NUZ1 547 aa12.95□□□□□ -0.34
UBE3B-210ENST00000539599 DNAJB12Q9NXW2 375 aaKnown RBP12.95□□□□□ -0.34
UBE3B-210ENST00000539599 EML5Q05BV3 1969 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 ERVH48-1M5A8F1 160 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 MT-ND5P03915 603 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 YES1P07947 543 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 ATF1P18846 271 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 HNRNPA2B1P22626 353 aaKnown RBP12.94□□□□□ -0.34
UBE3B-210ENST00000539599 BTCP35070 178 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 RPS27P42677 84 aaKnown RBP12.94□□□□□ -0.34
UBE3B-210ENST00000539599 CCR6P51684 374 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 CLDN12P56749 244 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 KIAA1024LP59773 190 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 GPLD1P80108 840 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 BTBD16Q32M84 506 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 FAM205BPQ63HN1 556 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 NPSR1Q6W5P4 371 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 OR4C3Q8NH37 302 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 TRIM63Q969Q1 353 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 ZNF524Q96C55 264 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 SLC28A3Q9HAS3 691 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 TMEM27Q9HBJ8 222 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 DUSP22Q9NRW4 184 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 NUDT15Q9NV35 164 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 C2orf42Q9NWW7 574 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 MUC3AQ02505 3323 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 A0A0A6YYJ9 748 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 PRR32B1ATL7 298 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 B4DGG1 531 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 TNFSF14O43557 240 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 RCBTB2O95199 551 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 S100A1P23297 94 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 MAOBP27338 520 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 LBX1P52954 281 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 ARFIP1P53367 373 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 ZNF267Q14586 743 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-210ENST00000539599 MZT2BQ6NZ67 158 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 TMPRSS11FQ6ZWK6 438 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 CDK20Q8IZL9 346 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 FAM160A2Q8N612 972 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-210ENST00000539599 OR6K6Q8NGW6 343 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 NR4A3Q92570 626 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 FAM131CQ96AQ9 280 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 DERL3Q96Q80 235 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 RPRD1BQ9NQG5 326 aaKnown RBP12.94□□□□□ -0.34
UBE3B-210ENST00000539599 PCDHGB7Q9Y5F8 929 aa12.94□□□□□ -0.34
UBE3B-210ENST00000539599 AGR2O95994 175 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 TNFRSF4P43489 277 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 MTNR1BP49286 362 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 FAPQ12884 760 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 FCN2Q15485 313 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 YIF1BQ5BJH7 314 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 TAF8Q7Z7C8 310 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 SERPINA12Q8IW75 414 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 RCBTB1Q8NDN9 531 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 AUNIPQ9H7T9 357 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 KRCC1Q9NPI7 259 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-210ENST00000539599 GNG8Q9UK08 70 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 SLC35A3Q9Y2D2 325 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 ASXL3Q9C0F0 2248 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 ACOD1A6NK06 481 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 SLC22A31A6NKX4 558 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 KCNJ13O60928 360 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 ZNF3P17036 446 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 S1PR1P21453 382 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 ERVK-25P63136 954 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 ILF3Q12906 894 aaKnown RBP eCLIP12.93□□□□□ -0.34
UBE3B-210ENST00000539599 SF3A2Q15428 464 aaKnown RBP12.93□□□□□ -0.34
UBE3B-210ENST00000539599 GALNT6Q8NCL4 622 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 DUSP18Q8NEJ0 188 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 PHF21AQ96BD5 680 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 PELI1Q96FA3 418 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 NKX3-1Q99801 234 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-210ENST00000539599 KCNN2Q9H2S1 579 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 CDCP1Q9H5V8 836 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 FOLH1BQ9HBA9 442 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 TRPV5Q9NQA5 729 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 CYSLTR2Q9NS75 346 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 CLEC1BQ9P126 229 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 ST6GALNAC2Q9UJ37 374 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 ITGB1BP2Q9UKP3 347 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 NCKAP1Q9Y2A7 1128 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 HSPB11Q9Y547 144 aa12.93□□□□□ -0.34
UBE3B-210ENST00000539599 A0A1B0GTH9 108 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 URADA6NGE7 173 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 H7C1C5 153 aa12.92□□□□□ -0.34
UBE3B-210ENST00000539599 FZD7O75084 574 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms