RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 CDH11P55287 796 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 AADACL4Q5VUY2 407 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 NXNL2Q5VZ03 156 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 C16orf47Q6ZP98 133 aaPredicted RBP23.3■■□□□ 1.32
KLHL42-202ENST00000539176 ZBTB46Q86UZ6 589 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 LSRQ86X29 649 aaPredicted RBP23.3■■□□□ 1.32
KLHL42-202ENST00000539176 ZNF440Q8IYI8 595 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 BPIFA2Q96DR5 249 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 ARSGQ96EG1 525 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 DPH1Q9BZG8 443 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 HOXD1Q9GZZ0 328 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 OR51E2Q9H255 320 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 UBQLN3Q9H347 655 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 FLRT3Q9NZU0 649 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 CLEC2DQ9UHP7 191 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 SLC35A3Q9Y2D2 325 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 GPR52Q9Y2T5 361 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 PMF1-BGLAPU3KQ54 211 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 LOC100506127A0A0U1RQW1 187 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 SSX1Q16384 188 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 HLA-DQA1Q5Y7H0 255 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 DESI1Q6ICB0 168 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 SLC29A4Q7RTT9 530 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 GID4Q8IVV7 300 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 SAMD8Q96LT4 415 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 LPAR4Q99677 370 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 ISYNA1Q9NPH2 558 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 SEC14L4Q9UDX3 406 aa23.3■■□□□ 1.32
KLHL42-202ENST00000539176 FRG2CA6NGY1 282 aa23.29■■□□□ 1.32
KLHL42-202ENST00000539176 TCN2P20062 427 aa23.29■■□□□ 1.32
KLHL42-202ENST00000539176 OR2Y1Q8NGV0 311 aa23.29■■□□□ 1.32
KLHL42-202ENST00000539176 PFN4Q8NHR9 129 aa23.29■■□□□ 1.32
KLHL42-202ENST00000539176 RNF217Q8TC41 542 aa23.29■■□□□ 1.32
KLHL42-202ENST00000539176 THAP3Q8WTV1 239 aaPredicted RBP23.29■■□□□ 1.32
KLHL42-202ENST00000539176 CHCHD6Q9BRQ6 235 aa23.29■■□□□ 1.32
KLHL42-202ENST00000539176 NDUFB11Q9NX14 153 aa23.29■■□□□ 1.32
KLHL42-202ENST00000539176 C19orf25Q9UFG5 118 aaPredicted RBP23.29■■□□□ 1.32
KLHL42-202ENST00000539176 SERINC4A6NH21 518 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 ZNF12P17014 697 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 MAKP20794 623 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 HTR1FP30939 366 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 ZNF404Q494X3 552 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 TMEM164Q5U3C3 297 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 ULK3Q6PHR2 472 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 LNX2Q8N448 690 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 MCFD2Q8NI22 146 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 BAIAP2Q9UQB8 552 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 HCN1O60741 890 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 PSMA1P25786 263 aaKnown RBP23.28■■□□□ 1.32
KLHL42-202ENST00000539176 FOLR3P41439 243 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 WNT4P56705 351 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 SLC26A5P58743 744 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 RNF4P78317 190 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 ALG10BQ5I7T1 473 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 HSDL2Q6YN16 418 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 TMCO5AQ8N6Q1 288 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 ZNF527Q8NB42 609 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 OR4C3Q8NH37 302 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 GRHL3Q8TE85 626 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 SEMA4CQ9C0C4 833 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 C20orf141Q9NUB4 165 aa23.28■■□□□ 1.32
KLHL42-202ENST00000539176 TRBV11-1A0A0K0K1C0 115 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 METTL15A6NJ78 407 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 OR6C76A6NM76 312 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 BHLHE40O14503 412 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 TM4SF5O14894 197 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 CSRP1P21291 193 aaKnown RBP23.27■■□□□ 1.32
KLHL42-202ENST00000539176 PCOLCEQ15113 449 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 ARMC4Q5T2S8 1044 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 SMARCD3Q6STE5 483 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 ZNF441Q8N8Z8 693 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 CCNL2Q96S94 520 aaPredicted RBP23.27■■□□□ 1.32
KLHL42-202ENST00000539176 CENPOQ9BU64 300 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 JAM3Q9BX67 310 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 NXF2Q9GZY0 626 aaKnown RBP23.27■■□□□ 1.32
KLHL42-202ENST00000539176 SIAEQ9HAT2 523 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 RPS6KB2Q9UBS0 482 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 HS3ST3B1Q9Y662 390 aa23.27■■□□□ 1.32
KLHL42-202ENST00000539176 CNOT1A5YKK6 2376 aaKnown RBP23.26■■□□□ 1.31
KLHL42-202ENST00000539176 GVINP1Q7Z2Y8 2422 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 CH25HO95992 272 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 CSTAP01040 98 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 TBXA2RP21731 343 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 LCN1P31025 176 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 ADH7P40394 386 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 NOVA1P51513 510 aaKnown RBP23.26■■□□□ 1.31
KLHL42-202ENST00000539176 DNAJA4Q8WW22 397 aaPredicted RBP23.26■■□□□ 1.31
KLHL42-202ENST00000539176 H2AFY2Q9P0M6 372 aaPredicted RBP23.26■■□□□ 1.31
KLHL42-202ENST00000539176 MRTO4Q9UKD2 239 aaKnown RBP23.26■■□□□ 1.31
KLHL42-202ENST00000539176 SIGLEC7Q9Y286 467 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 FAM186AA6NE01 2351 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 CYC1P08574 325 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 SAGP10523 405 aaPredicted RBP23.26■■□□□ 1.31
KLHL42-202ENST00000539176 IDUAP35475 653 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 TGFBR1P36897 503 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 ETV1P50549 477 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 LINC00114Q6XXX2 140 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 ATP13A2Q9NQ11 1180 aa23.26■■□□□ 1.31
KLHL42-202ENST00000539176 MEPEQ9NQ76 525 aaPredicted RBP23.26■■□□□ 1.31
KLHL42-202ENST00000539176 STUB1Q9UNE7 303 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms