RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SLC25A18Q9H1K4 315 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 FN3KRPQ9HA64 309 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ZNF160Q9HCG1 818 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 INIPQ9NRY2 104 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 FBXL12Q9NXK8 326 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 SHPKQ9UHJ6 478 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 NDRG2Q9UN36 371 aaKnown RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 CFAP20Q9Y6A4 193 aaKnown RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 SNRPGP15A8MWD9 76 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 GABARAPH6UMI1 98 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ATP1B1P05026 303 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 HLA-DOBP13765 273 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 CCNOP22674 350 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 PSMB3P49720 205 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 CLDN20P56880 219 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 SEC61A1P61619 476 aaKnown RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 PIN1Q13526 163 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 GRM7Q14831 915 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 CNKSR3Q6P9H4 555 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 WDR5BQ86VZ2 330 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 FAM160A2Q8N612 972 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 OR1S2Q8NGQ3 325 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 TOMM40LQ969M1 308 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 SGK3Q96BR1 496 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 EHFQ9NZC4 300 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 MED1Q15648 1581 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 LRRC37A3O60309 1634 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 TMEM129A0AVI4 362 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 HBQ1P09105 142 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 SSBP1Q04837 148 aaKnown RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 MAP4K2Q12851 820 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 COL13A1Q5TAT6 717 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 PRAMEF8Q5VWM4 474 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 PRAMEF7Q5VXH5 474 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 WBP2NLQ6ICG8 309 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 TECPR1Q7Z6L1 1165 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 MFSD6LQ8IWD5 586 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 PELI3Q8N2H9 469 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ABHD4Q8TB40 342 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 DUSP19Q8WTR2 217 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 CPNE4Q96A23 557 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 WDR92Q96MX6 357 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 NKX3-1Q99801 234 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 YARS2Q9Y2Z4 477 aaKnown RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 INSL5Q9Y5Q6 135 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 NAV1Q8NEY1 1877 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 MYH15Q9Y2K3 1946 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 TRAPPC6AO75865 159 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 PAPLNO95428 1278 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 CPEP16870 476 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 RAB5AP20339 215 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 SNCAP37840 140 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 RPS19P39019 145 aaKnown RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 RAB28P51157 221 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ARSDP51689 593 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ATP1B3P54709 279 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 BDH1Q02338 343 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 OC90Q02509 493 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 GPR18Q14330 331 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 RAB30Q15771 203 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 TAF9Q16594 264 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ENTPD8Q5MY95 495 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 PIP5KL1Q5T9C9 394 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 STEAP1BQ6NZ63 245 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 C19orf35Q6ZS72 473 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 MBOAT2Q6ZWT7 520 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 CDH26Q8IXH8 852 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 PRSS58Q8IYP2 241 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 CLRN3Q8NCR9 226 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 OR52I1Q8NGK6 324 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 CREB3L4Q8TEY5 395 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 LINC01599Q8WXQ3 324 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 CDS1Q92903 461 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 METTL9Q9H1A3 318 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 LDAHQ9H6V9 325 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 LIN7BQ9HAP6 207 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 KCNK6Q9Y257 313 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ENTPD2Q9Y5L3 495 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 LEFTY1O75610 366 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ITGB2P05107 769 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 TPOP07202 933 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 EPHA1P21709 976 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 BCKDHBP21953 392 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ZNF133P52736 654 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 SEMG2Q02383 582 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 Q499Y3 187 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 GTDC1Q4AE62 458 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 FAM182AQ5T1J6 154 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 OTUD1Q5VV17 481 aaPredicted RBP6.48□□□□□ -1.37
SORT1-209ENST00000538502 B3GLCTQ6Y288 498 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 BAGE3Q86Y29 109 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 BAGE2Q86Y30 109 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 FRMD1Q8N878 549 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 C14orf79Q96F83 325 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 PTCHD1Q96NR3 888 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 SPNS1Q9H2V7 528 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 TMEM38AQ9H6F2 299 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 ACKR4Q9NPB9 350 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 RNF150Q9ULK6 438 aa6.48□□□□□ -1.37
SORT1-209ENST00000538502 FAM96BQ9Y3D0 163 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms