RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 LINGO2Q7L985 606 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 SLC36A1Q7Z2H8 476 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 SCN4BQ8IWT1 228 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 FBXO16Q8IX29 292 aaPredicted RBP6.2□□□□□ -1.42
USP28-207ENST00000538475 CFAP206Q8IYR0 622 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 OR2AK2Q8NG84 335 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 GPR32P1Q8NGA4 272 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 OR51Q1Q8NH59 317 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 OR5W2Q8NH69 310 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 OR14A16Q8NHC5 309 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 CDC26Q8NHZ8 85 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 SCAMP5Q8TAC9 235 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 ABHD4Q8TB40 342 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 THAP6Q8TBB0 222 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 PIGXQ8TBF5 258 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 TCTEX1D2Q8WW35 142 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 ARL11Q969Q4 196 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 VOPP1Q96AW1 172 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 ZNF285Q96NJ3 590 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 GINS4Q9BRT9 223 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 TINF2Q9BSI4 451 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 NDC1Q9BTX1 674 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 EDEM2Q9BV94 578 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 RIOK2Q9BVS4 552 aaKnown RBP6.2□□□□□ -1.42
USP28-207ENST00000538475 PINK1Q9BXM7 581 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 EBPLQ9BY08 206 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 CPEB1Q9BZB8 566 aaKnown RBP6.2□□□□□ -1.42
USP28-207ENST00000538475 QRSL1Q9H0R6 528 aaKnown RBP6.2□□□□□ -1.42
USP28-207ENST00000538475 CWH43Q9H720 699 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 SDHAF3Q9NRP4 125 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 SMCO4Q9NRQ5 59 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 C19orf73Q9NVV2 129 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 HAO2Q9NYQ3 351 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 NLGN3Q9NZ94 848 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 TREM2Q9NZC2 230 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 MARCH2Q9P0N8 246 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 NTMQ9P121 344 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 ZNF107Q9UII5 783 aaPredicted RBP6.2□□□□□ -1.42
USP28-207ENST00000538475 CRLS1Q9UJA2 301 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 PCDHGA9Q9Y5G4 932 aaKnown RBP6.2□□□□□ -1.42
USP28-207ENST00000538475 TICRRQ7Z2Z1 1910 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 KIAA1549LQ6ZVL6 1849 aa6.2□□□□□ -1.42
USP28-207ENST00000538475 NUP210LQ5VU65 1888 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 C2orf92A0A1B0GVN3 265 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 TCRBV16S1A1N1A0A5B0 115 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 PMS2P1A4D2B8 440 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 CD8B2A6NJW9 211 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 TMEM200CA6NKL6 621 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 RHPN2P1A8MT19 583 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 IQCF5A8MTL0 148 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 RFXAPO00287 272 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 GAPDHSO14556 408 aaPredicted RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 CXCL11O14625 94 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SYN3O14994 580 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SCAMP1O15126 338 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 ARPC1BO15143 372 aaKnown RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 PPM1DO15297 605 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 ARPC5O15511 151 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 OGG1O15527 345 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 BCL2L11O43521 198 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 CLEC3AO75596 197 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 TOXO94900 526 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 PMS2P2O95744 297 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 LATS1O95835 1130 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 MT-ND4P03905 459 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 URODP06132 367 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 MMP3P08254 477 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 CSF1P09603 554 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 CD3GP09693 182 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 UCHL1P09936 223 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 OR12D1P0DN82 309 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 ALPPL2P10696 532 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 ACP5P13686 325 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 ABOP16442 354 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 CERS1P27544 350 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SHC1P29353 583 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 ATP6V1E1P36543 226 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 FRKP42685 505 aaPredicted RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 RBM34P42696 430 aaKnown RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 SLC11A2P49281 568 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SRP9P49458 86 aaKnown RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 ARHGDIBP52566 201 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 PFN3P60673 137 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 RELQ04864 619 aaPredicted RBP6.19□□□□□ -1.42
USP28-207ENST00000538475 CXCL9Q07325 125 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SLC3A1Q07837 685 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 ST3GAL3Q11203 375 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 TDGQ13569 410 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 DOC2AQ14183 400 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 KCNAB1Q14722 419 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 SMCO1Q147U7 214 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 PEA15Q15121 130 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 MLANAQ16655 118 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 DECR1Q16698 335 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 PGGHGQ32M88 737 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 UAP1L1Q3KQV9 507 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 DUSP28Q4G0W2 176 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 TIGD5Q53EQ6 642 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 VWA2Q5GFL6 755 aa6.19□□□□□ -1.42
USP28-207ENST00000538475 NBPF12Q5TAG4 269 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms