RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 OR10H2O60403 315 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 HTR2BP41595 481 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 CAPZA2P47755 286 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 VSX2P58304 361 aaPredicted RBP13.19□□□□□ -0.3
USP44-203ENST00000537435 GPLD1P80108 840 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 RNASE12Q5GAN4 147 aaKnown RBP13.19□□□□□ -0.3
USP44-203ENST00000537435 TEX19Q8NA77 164 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 FAM98AQ8NCA5 519 aaKnown RBP13.19□□□□□ -0.3
USP44-203ENST00000537435 ZNF784Q8NCA9 323 aaPredicted RBP13.19□□□□□ -0.3
USP44-203ENST00000537435 OR51L1Q8NGJ5 315 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 THAP4Q8WY91 577 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 HSD17B8Q92506 261 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 HRASLS2Q9NWW9 162 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 SCML1Q9UN30 329 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 HSPB11Q9Y547 144 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 NPFFR2Q9Y5X5 522 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 ERVH48-1M5A8F1 160 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 TNFRSF10CO14798 259 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 RDH16O75452 317 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 IGKV1D-16P01601 117 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 CD3GP09693 182 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 SNRPBP14678 240 aaKnown RBP13.18□□□□□ -0.3
USP44-203ENST00000537435 HIST1H1CP16403 213 aaKnown RBP13.18□□□□□ -0.3
USP44-203ENST00000537435 ATF1P18846 271 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 RBM34P42696 430 aaKnown RBP13.18□□□□□ -0.3
USP44-203ENST00000537435 GNG2P59768 71 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 TFF2Q03403 129 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 FCN2Q15485 313 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 SLC36A2Q495M3 483 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 FAM205BPQ63HN1 556 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 GRAMD2AQ8IUY3 354 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 OR4D9Q8NGE8 314 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 RBCK1Q9BYM8 510 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 TRIM2Q9C040 744 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.18□□□□□ -0.3
USP44-203ENST00000537435 NUDT15Q9NV35 164 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 SERTAD3Q9UJW9 196 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 F5P12259 2224 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 A0A0J9YY10 115 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 HCRTR1O43613 425 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 DHFRP00374 187 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 SERPINA3P01011 423 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 NAA10P41227 235 aaPredicted RBP13.18□□□□□ -0.3
USP44-203ENST00000537435 GDI2P50395 445 aaKnown RBP13.18□□□□□ -0.3
USP44-203ENST00000537435 RAB38P57729 211 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 PPP1CAP62136 330 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 LYPD4Q6UWN0 246 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 KIAA1324Q6UXG2 1013 aaKnown RBP13.18□□□□□ -0.3
USP44-203ENST00000537435 HOXB13Q92826 284 aaPredicted RBP13.18□□□□□ -0.3
USP44-203ENST00000537435 SNAPC3Q92966 411 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 PELI1Q96FA3 418 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 CCDC3Q9BQI4 270 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 MED28Q9H204 178 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 DPAGT1Q9H3H5 408 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 CPNE7Q9UBL6 633 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 CHRNA9Q9UGM1 479 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 MRPS7Q9Y2R9 242 aaKnown RBP13.18□□□□□ -0.3
USP44-203ENST00000537435 YBX2Q9Y2T7 364 aaKnown RBP13.18□□□□□ -0.3
USP44-203ENST00000537435 ENTPD2Q9Y5L3 495 aa13.18□□□□□ -0.3
USP44-203ENST00000537435 TRAV1-2A0A0B4J238 106 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 NOTOA8MTQ0 251 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 OGG1O15527 345 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 IFI6P09912 130 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 SLC35E2P0CK97 266 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 ILF3Q12906 894 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP44-203ENST00000537435 FAM53BQ14153 422 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 CDK5R1Q15078 307 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 MANEAQ5SRI9 462 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 HACD4Q5VWC8 232 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 GHDCQ8N2G8 530 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 TOMM5Q8N4H5 51 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 LSMEM1Q8N8F7 131 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 YIPF5Q969M3 257 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 PHF21AQ96BD5 680 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 SMIM19Q96E16 107 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 MRGPRX1Q96LB2 322 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 HYLS1Q96M11 299 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 ZFP3Q96NJ6 502 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 CCDC86Q9H6F5 360 aaKnown RBP13.17□□□□□ -0.3
USP44-203ENST00000537435 EVA1AQ9H8M9 152 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 IER3IP1Q9Y5U9 82 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 ATG2AQ2TAZ0 1938 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 REV3LO60673 3130 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 MCIDASD6RGH6 385 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 FABP7O15540 132 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 NDUFB2O95178 105 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 OR2T7P0C7T2 308 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 EPXP11678 715 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 GBX2P52951 348 aaPredicted RBP13.17□□□□□ -0.3
USP44-203ENST00000537435 DGCR2P98153 550 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 SRSF5Q13243 272 aaKnown RBP13.17□□□□□ -0.3
USP44-203ENST00000537435 ZNHIT3Q15649 155 aaPredicted RBP13.17□□□□□ -0.3
USP44-203ENST00000537435 DEFB110Q30KQ9 67 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 KIRREL2Q6UWL6 708 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 ZNF761Q86XN6 746 aaPredicted RBP13.17□□□□□ -0.3
USP44-203ENST00000537435 OR9A4Q8NGU2 314 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 OR2T27Q8NH04 317 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 SCMH1Q96GD3 660 aa13.17□□□□□ -0.3
USP44-203ENST00000537435 CNN2Q99439 309 aaKnown RBP13.17□□□□□ -0.3
USP44-203ENST00000537435 PBX4Q9BYU1 374 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms